Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq10 96.9 3e-15 seq57 89.7 4e-13 >seq10 Length=205532 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || || |||||||| ||||| |||||||| || | || ||| | ||| || Sbjct 110428 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCA 110369 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | |||||| || ||| | ||||| |||||||| || || | ||||| ||||| | Sbjct 110368 AGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGA 110309 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || ||||| || || | | | | ||| || ||| ||| | ||||| || ||| Sbjct 110308 ATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTG 110249 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAA 20215 ||||| | || || || || |||||||||||| || Sbjct 110248 CCGGTAAGAGTCTTTACGAAGATTTGCATTTTTTAA 110213 >seq57 Length=110979 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||||||| || |||||||| ||||| ||||| || |||| | || | |||||| Sbjct 11232 ACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCTTCG 11291 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | |||||| || ||| | || || | |||||||| || | ||||| ||||| | Sbjct 11292 AGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 11351 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||||||||| || | | | | || || || || ||| | ||||| || || Sbjct 11352 ATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCGTCTTT 11411 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || | || |||||||| |||||||| Sbjct 11412 CCAGTAAGTGTCTTGACAAAGATTTGCAT 11440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419584157337195