Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq9 145 9e-30 >seq9 Length=217876 Score = 145 bits (160), Expect = 9e-30 Identities = 457/692 (66%), Gaps = 51/692 (7%) Strand=Plus/Minus Query 6703 TGAGGATTATAAT---CTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATCA 6759 |||||||| || | |||||| ||||||||||||| || |||||| | | |||| Sbjct 9225 TGAGGATTGTAGTTCTCTAACA---CAAAATCTTCAAACTTGAAATCATCGATAGTATCT 9169 Query 6760 GACtttttttttAATATTACAAC-AGGTGAAGGTTTTATTGATCGAGTT-AAT-TGTTCT 6816 ||||| || || || || ||| |||| || | || ||| ||| |||| Sbjct 9168 -ACTTTACGGTTGATTTTTAAAGTAGGGAAAGGCTTGGGT--TCACGTTGAATCTGTTGC 9112 Query 6817 TTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCA 6876 || | || | | |||||| | ||||| ||| | ||| || | ||||| || |||||| Sbjct 9111 TTAAGTGCGTCAAGATGATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCA 9052 Query 6877 CCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACA 6936 || || | | ||| | || ||||| | ||| || | ||||||||| || | | Sbjct 9051 CCAGGATCAAGATCTGTTACATGCGCAATCATGCGTGTCAAAAGTGCATAAGAGGCAATA 8992 Query 6937 TTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAAAAT- 6995 || ||||| ||||| | ||||||||| || | ||||||| |||||| || | Sbjct 8991 TTGAAAGGAACACCCAGTCCCATATCACAAGAACGTTGATAAAGCACACAAGACAACTTG 8932 Query 6996 -----------ATT-----GTCTAT-AG---CATAAAATTGACACAATACATGACATGGA 7035 || || || || ||||||||||||| || ||||||| || Sbjct 8931 GCACGTCCGCCATCCTGAGGTGGATTAGATACATAAAATTGACAAAAGGCATGACAAGGC 8872 Query 7036 GGTAAAACAGCCTGATCT--ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTAT 7093 |||||| | | |||| ||||| | || ||||| || | || | || | | || Sbjct 8871 GGTAAAGC--CATGATAGGAATATCTGCAGGGTTCCATGCTGACAGAATGATTCTGCGAT 8814 Query 7094 CATTTGGATTTGTTTTTAATTTTGTT-ATAATTATTTGTAATTGATCTATACCCTGACCT 7152 || | ||||| |||||| || ||| || | | |||||||||||| || || || ||| Sbjct 8813 CAGTAGGATT-GTTTTTTATAGTGTCGATCACTTGTTGTAATTGATCAATGCCTTGCCCT 8755 Query 7153 TCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAA 7212 ||||| ||||| ||||| | || || || ||||| |||||||||||||| || || Sbjct 8754 GTATAATCAGTATCACAATCAACGTATTTGGCACCAAAGTGTCTCCATTGAAATCCGTAG 8695 Query 7213 ATAGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAA----TCGATTTAAATTAGA 7268 | || || | ||||||||| ||| ||| |||| ||||| |||| | ||| | Sbjct 8694 ACTGGTCCAAGATCACCTTCACGACGGTGAGTAAAACCTAACTTGTCGA--GATATTCG- 8638 Query 7269 TTTTGATCCATAAGCATCCCAAATATGTACAGAtttttttGA--TAAATTTAAAGAATTT 7326 || || | |||||||||| | || |||| ||| | || || || ||| Sbjct 8637 -CGAGAACCGTTGCCATCCCAAATCTTGAC--ATTTCTTTCACTTAGATGCTTTGAGTTT 8581 Query 7327 GTAGATCCTTTAAGGAACCATAAAAGTTCTTC 7358 ||| |||||||| |||||| | |||||||| Sbjct 8580 GTATCTCCTTTAATGAACCAAAGCAGTTCTTC 8549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595867568202000