Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq57 138 1e-27 seq10 111 1e-19 seq24 98.7 9e-16 >seq57 Length=110979 Score = 138 bits (152), Expect = 1e-27 Identities = 159/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 ||||| || | ||||||||||||||| | |||||| ||||| ||| || || ||| | Sbjct 11232 ACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCT--TAGGGTACGACCATCTT 11289 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || ||||| || ||||||| | | ||| ||||| |||||||||||||| ||||| | Sbjct 11290 CGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTT 11349 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||||||| || || | ||| |||||||| ||||| || | || || || | Sbjct 11350 GAATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCGTCT 11409 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 |||||||||| || || |||||||| |||||| Sbjct 11410 TTCCAGTAAGTGTCTTGACAAAGATTTGCATG 11441 >seq10 Length=205532 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | |||||||||||||| | ||| || || |||| ||| |||||| Sbjct 110428 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCA 110369 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| || ||||||| | ||| || || || ||||| |||||||| ||||| | | Sbjct 110368 AGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGA 110309 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| |||||| ||| | | |||| ||||| || | || || || || Sbjct 110308 ATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTG 110249 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| || || ||||| ||||| Sbjct 110248 CCGGTAAGAGTCTTTACGAAGATTTGCAT 110220 >seq24 Length=153386 Score = 98.7 bits (108), Expect = 9e-16 Identities = 106/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 || ||||| | ||||||||||||||| | |||||| ||||||| || || || || | Sbjct 151810 ACTAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGCTCA-AG-GTACGACCGTCTT 151867 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || ||||| ||| ||||||| | | ||| || || |||||||||||||| ||||| | Sbjct 151868 CGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTGTCTT 151927 Query 94917 AAATTTTTGCCTTGACG 94933 ||| ||| ||||||| Sbjct 151928 GAATCTTTTGCTTGACG 151944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448287865834200