Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq66 178 2e-39 >seq66 Length=102801 Score = 178 bits (196), Expect = 2e-39 Identities = 357/526 (68%), Gaps = 4/526 (1%) Strand=Plus/Plus Query 193645 CTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGT 193704 ||||| | || ||||||| |||||| |||||| || || || ||||| ||| |||| | Sbjct 12563 CTGAGGTTTACAATCTTGCAGCTCAATCTCATGTCAAGGTCTCTTTTGACATGTCAGAAT 12622 Query 193705 ATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGG 193764 |||| | | || || ||| | || || ||| | | ||||| || | |||| ||| Sbjct 12623 ATACCGGTGACGTCGACGCTCTTGGCACACTTCGTTTGCTTGATGCTATCCGTAC-TTGC 12681 Query 193765 GAATGGA--GAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGT 193822 | | | || | |||||| ||||||| || ||||| ||||| |||||| || Sbjct 12682 GGTTTAACCGATCG-TGTTCGTTTCTATCAAGCTTCTACTTCTGAACTCTATGGTAAAGT 12740 Query 193823 TCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGC 193882 | | || || | | ||||| ||||| || |||| || ||||||||||||||||| Sbjct 12741 AGTTGAAACACCCCAAAAGGAAACGACACCCTTCTATCCCCGTTCTCCTTATGGTGTAGC 12800 Query 193883 AAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAG 193942 ||| | ||||| |||||||| | || || ||||| ||||| | || | Sbjct 12801 CAAGCTTTATGGCTATTGGATTACGGTCAACTACCGTGAATCATACAACATGTTTGCCTG 12860 Query 193943 TTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAA 194002 | |||||||||||||| || ||||| || | | ||| || || || || || || Sbjct 12861 TAACGGTATTCTCTTCAACCATGAATCGCCTCGTCGTGGTCGTACCTTCGTTACCCGAAA 12920 Query 194003 GATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAA 194062 ||||| | | | | | | ||| | ||| || || |||||||| ||||| Sbjct 12921 GATTAGTCGTGCTGTTGCAGACATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTAA 12980 Query 194063 TCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAAT 194122 | || |||||||| | ||||||||||| || |||||||| || | |||||| | || Sbjct 12981 TATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAGGGTATGTGGCTCAT 13040 Query 194123 GTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 | |||| || ||| |||| | |||| ||| | ||||| |||||| Sbjct 13041 GCTGCAGCAAGATCAACCTCAAGATTTTGTCTTGGCTACTGGTGAA 13086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807549193808200