Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq15 499 4e-136 seq80 250 3e-61 >seq15 Length=177086 Score = 499 bits (552), Expect = 4e-136 Identities = 1377/2097 (66%), Gaps = 34/2097 (2%) Strand=Plus/Minus Query 62025 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 62084 ||||| || || ||||| || || |||| || ||| || ||||| |||||||| Sbjct 94318 GTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAACCATAAAAGTGCATACTG 94259 Query 62085 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 62144 || || || | | | || || || ||| ||| |||| | ||||||||| || || Sbjct 94258 GTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATA 94199 Query 62145 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 62204 | || || | || |||||||| | ||||| || ||| | |||||||| | || Sbjct 94198 TACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGTC 94139 Query 62205 TTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATGGATCCACCATCT 62261 || || | || | || | | ||| | | | | |||||||| ||||| || || Sbjct 94138 TTGTAGAGGTCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTCA 94079 Query 62262 GCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 62321 ||||| ||| ||||||| | || |||||||| | | || || | | | ||| Sbjct 94078 GCCATGATCATATTCTTCACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAGT 94019 Query 62322 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 62381 | ||||| || | |||| |||| || || | || | || ||||||| || Sbjct 94018 AACCAAGGATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGAT 93959 Query 62382 GTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 62441 || || ||||| | | ||||| || | ||||||| ||| || ||||| |||||| Sbjct 93958 GTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATA 93899 Query 62442 GGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTT 62499 || || |||| | | || | | ||| ||| | | || || || || || | Sbjct 93898 GGAGCAACCAGCAGAGAGTTACGGACACC--ATGCTTGGCAATCTTTTCCTTGAGTGCGG 93841 Query 62500 CCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTAC 62559 |||| | |||||||| | ||| || ||| || ||||| || Sbjct 93840 CCCAGTCCCAAAGATTGGTAGGTGTGACATTCCACATGTCGTATTGCAGGATACCCTT-- 93783 Query 62560 TGGCGTAC---GAT-CCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAA 62615 | ||| | | ||| |||| || ||||| ||||| | ||| ||||| | || ||| Sbjct 93782 --GGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAA 93725 Query 62616 CTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGTGC 62674 || || || ||| | | || |||||||| ||||| | | || | | |||| || Sbjct 93724 GAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTG-GC 93666 Query 62675 TTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACC 62734 ||| | ||| ||||||||| | | || || | ||| ||||| ||||||||||| Sbjct 93665 TTCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACC 93606 Query 62735 AATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATT 62794 | ||| || |||||||||||||| || || |||| ||||| | |||||| ||||| Sbjct 93605 TAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAATT 93546 Query 62795 AATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAG 62854 ||||| || || || || | ||||| || || ||| ||||| | |||||| | Sbjct 93545 GATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTG 93486 Query 62855 AAAATCAAA---TCGCCCATCTATTACAAACATGTTCAAGGCAACAGATGCCAGATTACA 62911 |||||| | | | || || ||| | | | |||| || |||| ||||| Sbjct 93485 GAAATCATACTTTTCTCTATTGATCACATAGGTAGGTAGAGCAATGGAGGCCAAGTTACA 93426 Query 62912 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 62971 || || || |||| || | | |||| | || || || || || || || ||||| Sbjct 93425 GACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTGCTGCACTT 93366 Query 62972 GATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 63031 ||| || || || ||||| |||||||||||| ||||||| ||||||||||| || ||||| Sbjct 93365 GATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAA 93306 Query 63032 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTAT 63091 |||| ||||||| || | || | || | ||| || | ||| | | ||||||| || Sbjct 93305 TGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGAGCCTTGAT 93246 Query 63092 TATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCC 63151 | | | | ||| | ||| | ||||||| | ||| | | || ||||| || Sbjct 93245 TGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAATTCGTCACC 93186 Query 63152 CCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATC 63211 ||| || | | ||||||||| ||||| || || | | ||||| || || | || Sbjct 93185 CCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATCACCACCGTC 93126 Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTC 63270 | || || | ||| || |||||||||| ||| ||||| ||| || ||||| | | || Sbjct 93125 TCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGC-ATAGAACAGATCACGAGCTC 93067 Query 63271 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63330 | ||| || || || || ||| | || | || | | ||| || | ||||| Sbjct 93066 TGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTCTGCATGCC 93007 Query 63331 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 63390 | ||||||||||| || || | | || || || || || || || ||||| | || | Sbjct 93006 AGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCGACATAAC 92947 Query 63391 TAGCGGTGTTATTATAAACTCTCAACATTGG-AATAATACCGTTTGATATACCATTGGTA 63449 ||| || || || |||| | | ||| || |||||| ||||| || ||| ||||| Sbjct 92946 GAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGGAGTAACCGTTGGTG 92888 Query 63450 CCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCC 63509 |||| || || |||||| |||||||| || ||| | || || || ||||| Sbjct 92887 CCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCGCCTGCT 92828 Query 63510 ATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCG 63569 | || |||||| || || ||| | ||| ||||||||||| || || ||| || Sbjct 92827 GTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTTCC 92768 Query 63570 ATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 63629 ||||| | || | ||||| |||||||||| ||||| || || ||||||||||| Sbjct 92767 TTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATTAAATAAA 92708 Query 63630 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAG 63689 |||||| |||||| ||||| || ||||||| | | ||||| ||||||||||||| Sbjct 92707 GTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAGCTGCA 92648 Query 63690 TCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63749 || ||||| | ||| || || | || |||||||| | || || ||||| | |||| Sbjct 92647 TCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGAGGACGTTCA 92588 Query 63750 ACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 63809 | |||||| || || || | | ||| || || | ||||| |||||||| || Sbjct 92587 GCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGGTTTTGAAACCAAAGAAG 92528 Query 63810 TTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTT---GAGTTTATCCTTATATT 63864 ||||| ||||| || || || || || ||| | ||||| | | | | | |||| Sbjct 92527 TTGTACTTGAAA--TCACGGTCATAGATGATAGCAGAGTTCAAGCGGTCAGCGTTATCCA 92470 Query 63865 TGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 63924 || ||| | | | || | | || || || || || ||||| || | || |||| Sbjct 92469 TGACGACTTTGTAC---GTTTCATTAGAGATCATGGGTGAGTGTTTGCCTGTCTTGGGAT 92413 Query 63925 TAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTA 63984 | ||||| ||| | || || || || |||| | ||| | ||||| ||||||||||| | Sbjct 92412 TCACATAATTGTACAAGTCTTCGATTACTTGAGAAAAGACCTTTTTGGTTTCCTTGTGAA 92353 Query 63985 GATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG 64044 |||| || | ||| || | || || | | |||||||| ||||| | || || | Sbjct 92352 GATTAGAAATGGCAATGCGCGCAGCCAACAGAGCATAATCAGGATGGCGAGTGGTCATAT 92293 Query 64045 TGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATA 64101 || ||| |||| || || || | || | ||| || ||||| || || | |||| Sbjct 92292 AAGCAGCTGTTTCTGCAGCAAGGTTATCGAGTTCAACAGTTGTAACACCTTGGTATA 92236 Score = 111 bits (122), Expect = 2e-19 Identities = 278/421 (66%), Gaps = 5/421 (1%) Strand=Plus/Plus Query 62033 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 62092 ||| ||||| || || ||||| || |||| | ||||| |||||| || ||||| Sbjct 131511 ATAATACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAGTTT 131570 Query 62093 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62152 | | | | || || || || | ||||||||||||| ||| || || |||||||| Sbjct 131571 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCAATAAAGGCTCC 131630 Query 62153 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 62212 ||||| || ||||| | || || || |||||| ||| ||||| | || || || | Sbjct 131631 TCTGTCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTCTTGTATAG 131690 Query 62213 TCGCTTAATATCTTCTGGAAGGTTTGTATTCTGAATGGAT----CCACCATCTGCCATAA 62268 || | ||| || |||| | | | | | ||||| ||||||| || || | Sbjct 131691 CTTTTTGAGATCATCAGGAATGCCAGGAATACG-TTGGATACTACCACCATGAGCGATCA 131749 Query 62269 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 62328 || | |||||||| | |||||||||||| || | | | | || | |||| Sbjct 131750 TCATGTTCTTGATGTTATCATTCCATAAACCGAGTTCAATGAGGTCATTCAGTAAATGCT 131809 Query 62329 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 62388 | || |||| ||| ||||| ||| || | || || |||||||| || || || | Sbjct 131810 GGTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAG 131869 Query 62389 GTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62448 | || | | || ||||| ||||| |||||| ||| ||||| |||||||| || | Sbjct 131870 GCTCAAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAA 131929 Query 62449 C 62449 | Sbjct 131930 C 131930 >seq80 Length=87281 Score = 250 bits (276), Expect = 3e-61 Identities = 565/845 (67%), Gaps = 7/845 (1%) Strand=Plus/Plus Query 33015 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33074 ||| || ||| ||||| ||||| || || || || || |||| | || || | || Sbjct 44259 TTGATAATCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 44318 Query 33075 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 33134 ||| || ||||| ||||||||| | | ||||| || | ||||| | || || | Sbjct 44319 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAG 44378 Query 33135 TCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 33194 | ||| || |||||||| || || ||||| || | ||||| || || || Sbjct 44379 ACGATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGC 44438 Query 33195 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 33254 || |||||||| | || | |||||||||||||||| || || || || ||| Sbjct 44439 GACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATC 44498 Query 33255 TCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATC 33314 | ||| ||||| || || | | | ||| |||| | | ||| || || || Sbjct 44499 CTTGACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGTC 44558 Query 33315 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 33374 || ||||| || || | || || | ||| ||| || || | |||||||| || Sbjct 44559 AGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAG 44618 Query 33375 GCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTAC 33434 ||||| ||||| |||||||| |||||||| || || ||||| |||||||| ||||| || Sbjct 44619 ACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGAC 44678 Query 33435 TGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGA-- 33492 ||||||||||||| ||| | || || || || | ||||| ||||| Sbjct 44679 AGCAGCAAAGGCAACAAGACGTTCAGCAAAAGAACCGTTAGAGGAAATCCA--TTTGAAG 44736 Query 33493 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttt 33552 |||||||| ||||| | || | |||||| || || || || ||| |||||| | | Sbjct 44737 GCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCT 44796 Query 33553 ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATG 33612 || || | | ||||| | |||||| || ||||||||||| || |||| | ||||| Sbjct 44797 TTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATA 44856 Query 33613 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTA 33672 |||||||| || ||||| || ||||||||| |||| || | ||||| ||||| | Sbjct 44857 TTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATCA 44916 Query 33673 CAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 33732 ||||| || |||| |||||||| || || || || | ||||| || ||||| Sbjct 44917 CAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCCAAA 44976 Query 33733 ACATGTTTTATAAAATATTTTTCGTCT--GGTGTTAGT-TTATTCCAATCATTGATATCT 33789 || | ||||| | ||||| | ||| | | || | |||||||| | || Sbjct 44977 ACGCGAGAGATAAAGAAACGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGGTCC 45036 Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849 || | ||| | |||||| |||||||||| || || || || || ||||| | | | Sbjct 45037 TTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAATTGC 45096 Query 33850 CAGAT 33854 ||||| Sbjct 45097 CAGAT 45101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622942566830200