Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq57 152 5e-32 seq24 120 3e-22 seq118 113 4e-20 >seq57 Length=110979 Score = 152 bits (168), Expect = 5e-32 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || ||| | |||||||| |||| || | ||| | || || Sbjct 11440 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACGATTACTTTAGAAGTCGAGTCTTCT 11381 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || |||||||| ||| ||||| ||||| || ||||| |||||| Sbjct 11380 GACACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 11321 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | || |||||||||||||||| | | | | | |||||||||||| Sbjct 11320 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAAC 11261 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||||||| | ||| ||||||| Sbjct 11260 ATCCAAAAGGAATCTACTCTTCATTTGGTCCT 11229 >seq24 Length=153386 Score = 120 bits (132), Expect = 3e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||| || | ||||| ||||||||| ||||| ||||| || ||||| || || Sbjct 151959 CGACACCATTGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCA 151900 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||| | || || | | ||| |||||||||||||| | | | | | | ||||||||||| Sbjct 151899 ACAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGCGACTATAA 151840 Query 26948 CATTCAAAAAGAATCTACTATCCA 26971 ||| ||||| ||||||||| |||| Sbjct 151839 CATCCAAAAGGAATCTACTCTCCA 151816 >seq118 Length=67844 Score = 113 bits (124), Expect = 4e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| |||||||| || || ||||| || ||||| |||||| Sbjct 18956 GACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 19015 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| || ||| |||||||||||||| | | | | | | || || || ||| Sbjct 19016 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAAC 19075 Query 26949 ATTCAAAAAGAATCTAC 26965 |||||||| |||||||| Sbjct 19076 ATTCAAAAGGAATCTAC 19092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478658839948400