Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq15 347 3e-90 seq80 152 1e-31 seq9 147 6e-30 >seq15 Length=177086 Score = 347 bits (384), Expect = 3e-90 Identities = 1340/2081 (64%), Gaps = 27/2081 (1%) Strand=Plus/Plus Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150 ||| |||| | ||||||||||||||| | || || || ||||| | |||||| || || Sbjct 92232 GGTGTATACCAAGGTGTTACAACTGTTGAACTCGATAACCTTGCTGCAGAAACAGCTGCT 92291 Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210 ||| |||||| ||||||||||| | ||||||| |||||||| |||| | Sbjct 92292 TATATGACCACTCGCCATCCTGATTATGCTCTGTTGGCTGCGCGCATTGCCATTTCTAAT 92351 Query 363211 CTTCATAAAATGACATCAAATAAGT--TTTCCAGTGTCATGGATAGTCT-GTATAACTAT 363267 ||||| || || | |||| | || |||| || || || || || ||| || ||| Sbjct 92352 CTTCACAAG--GAAACCAAAAAGGTCTTTTCTCAAGTAATCGA-AGACTTGTACAATTAT 92408 Query 363268 GTCAATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATC 363327 || ||| | ||||| || || ||||| | || | |||| | | || || Sbjct 92409 GTGAATCCCAAGACAGGCAAACACTCACCCATGATCTCTAATGAAACG-TACAAAGTCGT 92467 Query 363328 CGTTC-TAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA 363386 | | ||| || || || | | ||||| ||||| ||| || |||| | Sbjct 92468 CATGGATAACGCTGACCGCTTGAACTCTGCTATCATCTATGACCGTGATTTCAAGTACAA 92527 Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTG 363445 | || || | || || | ||| || ||||| |||| || | || | |||| Sbjct 92528 CTTCTTTGGTTTCAAAACCCTCGAGCGTTCTTACCT-TCTCAAGATTGACGGCAAGATTG 92586 Query 363446 TTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTG 363505 |||||| || || ||| || | ||||||||||| || ||||||||| | | ||| ||| Sbjct 92587 CTGAACGTCCTCAACATTTGATCATGCGTGTTGCGATCGGTATCCATGGAACCGATATTG 92646 Query 363506 ATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAA 363565 |||| || ||||| ||||| || | | || | || || ||||| | || | Sbjct 92647 ATGCAGCTATTGAGACATACAACTTGATGTCTGAAAGATACTTTACACACGCTAGTCCTA 92706 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT-CTAAAAATG 363624 | | | ||||| || || | | ||| || ||||||||||| |||||| || | ||| Sbjct 92707 CTTTATTTAATGCAGGCACACCTCGTCCCCAAATGTCTTCTTG-TTTCTTGCTCACCATG 92765 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 ||||| ||||| ||||| ||||||| ||| || || || | ||||||| || |||||| Sbjct 92766 AAGGAAGATTCGATCGAAGGTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCCAAG 92825 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACA--GAACAGTTACATTC 363742 | |||||||| ||||| | || ||||| ||||||| || || |||||| Sbjct 92826 ACAGCAGGCGGTATTGGCTTGAACATTCACAACATTCGTGCTAGTGGATCA--TACATTG 92883 Query 363743 GCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 |||||| || ||||| || || | | |||||||| ||||| || ||||||| | Sbjct 92884 CCGGCACCAACGGTTACTCCAACGGATTATTGCCCATGCTCCGTGTTTTCAACAATACGG 92943 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 | | || ||||| || || || ||||| || || || || ||||| | || | Sbjct 92944 CTCGTTATGTCGATCAAGGCGGTAATAAGCGTCCGGGCGCATTCGCAATGTACTTGGAAC 93003 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922 | ||||| || ||||| ||| | || | || |||||| || ||||| ||| Sbjct 93004 CCTGGCATGCAGACATTTTCACCTTTTTAGACTTGCGAAAAAACTTTGGTAAAGACGAAA 93063 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT-G 363981 | | || ||||||||||||||||| || |||||| |||| | ||| ||| |||| || Sbjct 93064 TCAGAGCTCGTGATCTGTTCTATGCTCTCTGGGTTCCTGATCTTTTCATGCAGCGTGTCA 93123 Query 363982 GAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTA 364041 ||| | ||| ||||||| || |||||||| | ||| ||| || | || || Sbjct 93124 GAGAC-GGTGGTGATTGGTCTCTATTTTGCCCCAATGAAGCTCCTGGATTACATGAAGTC 93182 Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101 ||||||||||| | ||||||||| || ||||| || ||| || |||| ||| | | Sbjct 93183 TGGGGTGACGAATTTGTTGCTCTCTATGAAAAATACGAACGTGAAGGAAGAGCTAGAGAA 93242 Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 ||||| || || ||||| |||| |||||| |||| | || | ||||| || | Sbjct 93243 ACAATCAAGGCTCAAAAGCTGTGGTATGCCATTTTGGAGGCACAAACGGAGACTGGTAAT 93302 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 || | || | || || ||| | || ||| | ||| || ||||| || | ||||| Sbjct 93303 CCATTCATACTCTATAAGGATGCTTGTAACAGAAAGAGTAATCAGCAAAACTTGGGTACG 93362 Query 364222 ATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 || || |||||||| ||||| || ||| |||||||| | ||| || || || Sbjct 93363 ATCAAGTGCAGCAACCTGTGTACAGAAATTGTTGAATACTCAAGTCCTGATGAAGTCGCT 93422 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT----AAAAGATGGTACTTTTGA 364337 || |||||| | || || || || || || | | ||| || ||| | | | ||| Sbjct 93423 GTCTGTAACTTGGCCTCCATTGCTCTACCTACCTATGTGATCAATAGA-GAAAAGTATGA 93481 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397 ||| | || | || || ||| | | ||| | || | ||||| | || || Sbjct 93482 TTTCCAAAAACTGCACGATGTTACCAAGGTTATCACTAGAAACTTGAACAAGATCATTGA 93541 Query 364398 CAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGG 364457 | ||||| ||||| | |||||||| | || || | | | ||| | |||||||| Sbjct 93542 TATCAATTACTATCCTGTCATCGAAGCCGAAAGATCCAACAAGAGACATAGACCGATTGG 93601 Query 364458 TCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGC-TCAAGATGGCATTTGATTCGC 364516 | | ||||| || || | || ||| ||| ||| | || || |||| ||||| | Sbjct 93602 TTTAGGTGTTCAAGGTTTAGCCGACACTTTCATGGCCCTTCGTTAT-CCATTCGATTCAC 93660 Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576 | || || | || | | ||||||||||| || || ||| || || | Sbjct 93661 CAGAAGCCAAGCAGTTGAACATTCAAATCTTTGAAACCATCTACCATGCTGCCTTGGAAG 93720 Query 364577 CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTT 364636 | || || || ||||| ||| | ||| ||| || ||||| || |||| | | Sbjct 93721 CCTCTTGCGAGTTGGCTGAAAAGTATGGACCCTACGAAACCTATGAAGGCAGCCCTGTAT 93780 Query 364637 CGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGG 364696 | |||| | | || | || | ||||||||||| || | | ||| |||||| Sbjct 93781 CCAAGGGTATCCTGCAATACGACATGTGGAATGTCACACCTACCAATCTTTGGGACTGGG 93840 Query 364697 ATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCA 364756 | || || || ||||||||| || ||||| || | || || | Sbjct 93841 CCGCACTCAAGGAAAAGATTGCCAAGCATGGTGTCCGTAACTCTCTGCTGGTTGCTCCTA 93900 Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816 |||| || || || ||| | || || ||||| ||| || || || ||||| | ||| Sbjct 93901 TGCCTACTGCCTCCACTTCTCAAATGCTCGGTTTCAATGAATGTTTTGAACCTTACACAT 93960 Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876 ||| |||| | || || || || || || |||| || | || ||| | || Sbjct 93961 CCAACTTTTACACCCGTCGTGTGCTCTCAGGTGAATATCAAATGGTCAATCCTTGGTTAC 94020 Query 364877 TCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTAT-ATCATCGCC 364935 | ||||| || || || ||| |||| ||||||| ||| ||||| || Sbjct 94021 TTCGTGATCTAGTTGATATGGGTCTCTGGAATGACGATGTGAAGAA-TATGATCATGGCT 94079 Query 364936 GCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAA 364995 | || ||| | |||||| | || | | || || | |||| | ||||| Sbjct 94080 GACGGAGGATCTATTCAGAACGTGCCCAGCATCCCTCAAAACTTGAAAGACCTCTACAAG 94139 Query 364996 ACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTT 365055 ||||| |||||||| || || ||| ||||||| ||||| || ||||| ||||| | | Sbjct 94140 ACCGTCTGGGAAATCTCTCAACGTACTATCATTGACATGGCTGCTGATCGTGGTGCGTAT 94199 Query 365056 ATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACA 365115 || || || || || ||| | || ||| || | || | || | ||||| || Sbjct 94200 ATTGACCAAAGTCAAAGTTTGAACATCTTTATGGCTGAACCCAACTTTGGTAAGCTCACC 94259 Query 365116 TCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||||| || || || ||| || || | |||||||| Sbjct 94260 AGTATGCACTTTTATGGTTGGCAAAAGGGATTAAAGACAGG 94300 >seq80 Length=87281 Score = 152 bits (168), Expect = 1e-31 Identities = 252/358 (70%), Gaps = 8/358 (2%) Strand=Plus/Minus Query 22291 CCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACA 22350 || || || | |||||||||||| | ||||| |||||||||||| ||||||| ||||| Sbjct 44900 CCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATTGAAAATATTCACGCAGAAACT 44841 Query 22351 TATTCTATGATGCTACAGTCACTCGTAG--AAGATAAAGACGAACAACGAAA--CTTATT 22406 || | | || | | |||| || |||| || | || || |||| || || Sbjct 44840 TACAGTCTTTTGATTGA--CACTTATATCAAAGACAACCAAGAGAAA-GAAATGCTCTTT 44784 Query 22407 CCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGAT 22466 | || ||| ||| || | | || |||| ||||| |||||||| | |||||||| Sbjct 44783 TCT-GCTATTGACACTATCCCTTGTATCAAGAGAAAGGCTGATTGGGCCTTCAAATGGAT 44725 Query 22467 GAACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTT 22526 | | | |||| || || ||||||||| |||| ||||||| || ||||| || || Sbjct 44724 TTCCTCTAACGGTTCTTTTGCTGAACGTCTTGTTGCCTTTGCTGCTGTCGAAGGTATCTT 44665 Query 22527 CTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCT 22586 ||| ||||| | ||| | | ||||||||||| |||||||||| | ||||| ||| | Sbjct 44664 CTTCTCTGGTTCCTTTGCTTCCATCTTTTGGCTCAAAAAACGTGGTCTGATGCCCGGTTT 44605 Query 22587 AACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 || || ||||| || || | || ||||| ||||||||||| || ||||| ||| Sbjct 44604 GACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTTCATACTGACTTTGCTTGT 44547 >seq9 Length=217876 Score = 147 bits (162), Expect = 6e-30 Identities = 413/623 (66%), Gaps = 51/623 (8%) Strand=Plus/Plus Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGG 111374 |||||||| || ||||||||||| || | | ||| | | |||||||| || ||| Sbjct 8504 TTTCCACTCCTGACAACAAAGCGTGTATTCTTCAGGGGTGTCTTGGAAGAACTGCTTTGG 8563 Query 111375 TTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGAT 111434 || ||| ||| |||||| |||| | || | || |||||| || ||||||||| Sbjct 8564 TTCATTAAAGGAGATACAAACTCAAAGCATCTAAGTGAAAGAAATGTCAAGATTTGGGAT 8623 Query 111435 GGAAATGGATCACGTGACTTTCTAGATTCAGTT-GGTCTTG-TCGACAACGAAGAAGGTG 111492 || || || || || || | ||| || |||| ||| || || | || ||||||| Sbjct 8624 GGCAACGGTTCTCGCGAATATCTCGACA-AGTTAGGTTTTACTCACCGTCGT-GAAGGTG 8681 Query 111493 ATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAA-ACCATG 111551 |||| |||||||| ||||||||||||||| | ||||||||||| |||| || || Sbjct 8682 ATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGC------CAAATACGTTG 8735 Query 111552 CACGACTCATA-TGATT---CA---CAGGGAACTGATCAATTACAGAATGTCATTGATCA 111604 | | ||| ||||| || || || | |||||||||||| | || || || Sbjct 8736 ATTG--TGATACTGATTATACAGGGCAAGGCATTGATCAATTACAACAAGTGATCGACAC 8793 Query 111605 AATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCA-- 111662 || || ||||| || ||| ||| | || ||| || ||||||||||| |||| Sbjct 8794 TATAAAAAACAATCCTACTGATCGCAGAATCATTCTGTCAGCATGGAACCC---TGCAGA 8850 Query 111663 -TTGGAAAAAATGGCACTTCCACCATGTCAT--CTTATGTGCCAGTTTTATGTA------ 111713 | | ||||| | || || |||||| ||| ||| || ||||||||| Sbjct 8851 TATTCCTATCATGGCTTTACCGCCTTGTCATGCCTTTTGT--CAATTTTATGTATCTAAT 8908 Query 111714 -CACGACGGGAT-GCTTTCATGCCAA-------------ATGTATCAGCGATCTGCTGAT 111758 ||| | |||| || | |||||| | ||||| || ||| |||| Sbjct 8909 CCACCTCAGGATGGCGGACGTGCCAAGTTGTCTTGTGTGCTTTATCAACGTTCTTGTGAT 8968 Query 111759 ATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCT 111818 || || || |||||||| || |||||||| ||| ||||| | || || | || || Sbjct 8969 ATGGGACTGGGTGTTCCTTTCAATATTGCCTCTTATGCACTTTTGACACGCATGATTGCG 9028 Query 111819 CATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTAC 111878 ||| | ||| |||| | || ||||||||||| || || || ||| | |||||||| Sbjct 9029 CATGTAACAGATCTTGATCCTGGTGAATTCATACATACAATGGGCGATACACATGTTTAT 9088 Query 111879 ACAAACCACATTGATGCACTTAA 111901 | || |||| |||||||| Sbjct 9089 GTGGATCATCTTGACGCACTTAA 9111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303343663965290