Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq57 138 1e-27 seq15 109 5e-19 seq10 104 2e-17 seq118 102 7e-17 seq24 100 2e-16 seq80 89.7 4e-13 >seq57 Length=110979 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || ||| | |||||||| ||||||| | ||||||||| | Sbjct 11440 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACGATTACTTTAGAAGTCGAGTCTTCT 11381 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || |||||||| ||| ||||| ||||| || ||||| |||||| Sbjct 11380 GACACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 11321 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | || || ||||||||||||| | | | | ||||| |||||| Sbjct 11320 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAAC 11261 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||| |||||||| ||||||| || Sbjct 11260 ATCCAAAAGGAATCTACTCTTCATTTGGT 11232 >seq15 Length=177086 Score = 109 bits (120), Expect = 5e-19 Identities = 308/458 (67%), Gaps = 19/458 (4%) Strand=Plus/Minus Query 133183 CAAGTCCaaaaaagtaaaaaTGTCTGCATGCCAAGGCTCGATATATACGGCCAAAGCGCC 133242 |||||| ||||| || ||||||||||||||||| || || | || | || || ||||| Sbjct 93038 CAAGTCTAAAAAGGTGAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCC 92979 Query 133243 TTTCC---TTTTACCTCCCTGATCCACATGTCTAAGCATGCTGTTGAAGACACGCAATGC 133299 | | ||||| || ||||| |||| | | | | ||||||| ||||| | || Sbjct 92978 CGGACGCTTATTACCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGA--GC 92921 Query 133300 AGGACCCA--ATCCTGCGGCAGTA-CCGTTGGTGGATTTGATTTTACTGTT--AGCGGCA 133354 | | | | |||| || |||| ||||||||| || | || | | ||| Sbjct 92920 ATGGGCAATAATCCGTTGG-AGTAACCGTTGGTGCCGGCAATGTA--TGATCCACTAGCA 92864 Query 133355 CGAAT-TTGAGAAACGTTAAGGCCTATACCGCCTCCGTGT-TTAGATATCATGGCACAAT 133412 ||||| ||| ||| ||| | ||| ||||||||| | ||| || || || ||||| Sbjct 92863 CGAATGTTGTGAAT-GTTCAAGCCAATACCGCCTGC-TGTCTTGGAGATTTGAGCACAGA 92806 Query 133413 CGTTGAGAGTTTTATAGATGCCATTGATGCTGTCTTCCTGGATGTTGAGCAAATAACACG 133472 ||||| || | |||||| || | ||| ||||||| ||| ||||||| |||| | Sbjct 92805 TTTTGAGCGTCTCATAGATACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAACAAG 92746 Query 133473 ACGACATCTGAGGCATTTTCATGCCAGAAGAAAACAAAGTGGGACTAGCGTGAGTAAA-C 133531 | ||||| || || |||| | | ||| ||||| ||||||||||| ||||| Sbjct 92745 AAGACATTTGGGGACGAGGTGTGCCTGCATTAAATAAAGTAGGACTAGCGTGTGTAAAGT 92686 Query 133532 AGCTTTGATCGCATCAATCTGTAGGACTCAATTGCGCTTTCAATGTCTTCACCATGAATT 133591 | |||| | |||||| |||| | |||||| || ||||| || ||||| || Sbjct 92685 ATCTTTCA-GACATCAAGTTGTATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATA 92627 Query 133592 TGTAGCGCTACACGCATCAGCATATGTTGAGGTCGCTC 133629 | ||| |||||||| | || ||||||||| || || Sbjct 92626 CCGATCGCAACACGCATGATCAAATGTTGAGGACGTTC 92589 >seq10 Length=205532 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 ||||||||| | || ||||| || | || || || ||||||| | |||||||| | Sbjct 110217 AAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGAATCT 110276 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 || | ||||| | ||||| ||||||||| ||||| ||||| || ||||| || Sbjct 110277 TCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGAC 110336 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 ||||||||||| || | | || || ||||| || |||| | | | || || || Sbjct 110337 CAACAGAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGACTAC 110396 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||| ||||| |||||||| |||| || || Sbjct 110397 AACATCCAAAAGGAATCTACCCTTCACTTGGT 110428 >seq118 Length=67844 Score = 102 bits (112), Expect = 7e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||||| || || ||||| || ||||| |||||| Sbjct 18956 GACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCAA 19015 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || |||| || ||| || ||||||||||| | | | | | || ||||| ||| Sbjct 19016 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAAC 19075 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| |||||||| |||| || || Sbjct 19076 ATTCAAAAGGAATCTACCCTTCACTTGGT 19104 >seq24 Length=153386 Score = 100 bits (110), Expect = 2e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||| || | ||||| ||||||||| ||||| ||||| || ||||| || || Sbjct 151959 CGACACCATTGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCA 151900 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || || | | ||| || ||||||||||| | | | | | ||||| ||||| Sbjct 151899 ACAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGCGACTATAA 151840 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| ||||| |||||||| | || ||||| Sbjct 151839 CATCCAAAAGGAATCTACTCTCCACTTAGT 151810 >seq80 Length=87281 Score = 89.7 bits (98), Expect = 4e-13 Identities = 298/457 (65%), Gaps = 25/457 (5%) Strand=Plus/Plus Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661 || || |||||||| || || |||||||| | ||||| || | | |||||| || || Sbjct 44272 ACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAAT 44331 Query 104662 GGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACA 104721 ||||| || | | || || ||| | ||||| | | || || ||||| || || Sbjct 44332 GGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAGACGATCAGCAACG 44391 Query 104722 AATTCGATGTACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGCG 104781 ||||||||||||| ||||| | | |||||||| | | |||||||| | ||| Sbjct 44392 AATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGCGACGGGAAGAGCA 44451 Query 104782 TTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTCCTTAAACATGTTCAGCACCTT---G 104838 | || ||||| |||| || ||| || |||||| || ||| | |||| | Sbjct 44452 TCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCC---AAGATG---ATATCCTTGACG 44505 Query 104839 CTTTCAGAAAGCTTGTCCTCTTTGGCAATATATTTGTTGTAATAGAGGCAGGCAAAGTCT 104898 | ||| ||| | | ||| | || | | | | | | || || |||||||| Sbjct 44506 CGTTC--TTGGCTAGGACGCTTACG-AAGA---TGGGTAAATAAAAGACAAGCAAAGTCA 44559 Query 104899 GTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAGCCAGGTA-GAG- 104956 || || | |||||||| | | | || | ||| |||||| | ||||| || || | || Sbjct 44560 GTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAGA 44619 Query 104957 CCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAGACAC 105016 || | ||||||| | | | |||||| |||||| ||| ||||| |||| || Sbjct 44620 CCACGTTTTTTGAGCC--------AAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATAC 44671 Query 105017 CTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAA 105053 ||||||| ||||| || || | ||||| || || Sbjct 44672 CTTCGACAGCAGCAAAGGCAACAAGACGTTCAGCAAA 44708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429932882292225