Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq15 488 7e-133 seq80 242 5e-59 >seq15 Length=177086 Score = 488 bits (540), Expect = 7e-133 Identities = 1386/2114 (66%), Gaps = 38/2114 (2%) Strand=Plus/Minus Query 61880 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 61939 ||||| || || ||||| || || |||| || ||| || ||||| |||||||| Sbjct 94318 GTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAACCATAAAAGTGCATACTG 94259 Query 61940 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 61999 || || || | | | || || || ||| ||| |||| | ||||||||| || || Sbjct 94258 GTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATA 94199 Query 62000 AAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTT 62059 | || || | || |||||||| | || || || ||| | |||||||| | || Sbjct 94198 TACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGTC 94139 Query 62060 TTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATGGATCCACCATCT 62116 || || | || | || | | ||| | | | | |||||||| ||||| || || Sbjct 94138 TTGTAGAGGTCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTCA 94079 Query 62117 GCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 62176 ||||| ||| ||||||| | || |||||||| | | || || | | | ||| Sbjct 94078 GCCATGATCATATTCTTCACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAGT 94019 Query 62177 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 62236 | ||||| || | |||| |||| || || | || | || ||||||| || Sbjct 94018 AACCAAGGATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGAT 93959 Query 62237 GTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 62296 || || ||||| | | | ||||| || | ||||||| ||| || ||||| |||||| Sbjct 93958 GTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATA 93899 Query 62297 GGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTT 62354 || || |||| | | || | | ||| ||| | | || || || || || | Sbjct 93898 GGAGCAACCAGCAGAGAGTTACGGACACC--ATGCTTGGCAATCTTTTCCTTGAGTGCGG 93841 Query 62355 CCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTAC 62414 |||| | |||||||| | ||| || ||| || ||||| || Sbjct 93840 CCCAGTCCCAAAGATTGGTAGGTGTGACATTCCACATGTCGTATTGCAGGATACCCTT-- 93783 Query 62415 TGGCGTAC---GAT-CCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAA 62470 | ||| | | ||| |||| || ||||| ||||| | ||| ||||| | || ||| Sbjct 93782 --GGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAA 93725 Query 62471 CTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGCGC 62529 || || || ||| | | || |||||||| ||||| | | || | | |||| || Sbjct 93724 GAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTG-GC 93666 Query 62530 TTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACC 62589 ||| | ||| ||||||||| | | || || | ||| ||||| ||||||||||| Sbjct 93665 TTCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACC 93606 Query 62590 AATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATT 62649 | ||| || |||||||||||||| || || |||| ||||| | |||||| ||||| Sbjct 93605 TAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAATT 93546 Query 62650 AATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAG 62709 ||||| || || || || | ||||| || || ||| ||||| | |||||| | Sbjct 93545 GATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTG 93486 Query 62710 AAAATCAAA---TCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACA 62766 |||||| | | | || || ||| | | | |||| || |||| ||||| Sbjct 93485 GAAATCATACTTTTCTCTATTGATCACATAGGTAGGTAGAGCAATGGAGGCCAAGTTACA 93426 Query 62767 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 62826 || || || |||| || | | |||| | || || || || || || || ||||| Sbjct 93425 GACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTGCTGCACTT 93366 Query 62827 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 62886 ||| || || || ||||| |||||||||||| ||||||| ||||||||||| || ||||| Sbjct 93365 GATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAA 93306 Query 62887 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTAT 62946 |||| ||||||| || | || | || | ||| || | ||| | | ||||||| || Sbjct 93305 TGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGAGCCTTGAT 93246 Query 62947 TATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCT 63004 | | | | || ||||| ||| | ||||||| | ||| | | || ||||| Sbjct 93245 TGTT--TCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAATTCGTCA 93188 Query 63005 CCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCA 63064 ||||| || | | | ||||||| ||||| || || | | ||||| || || | Sbjct 93187 CCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATCACCACCG 93128 Query 63065 TCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGT 63123 || | || || | ||| || |||||||||| ||| ||||| ||| || ||||| | | Sbjct 93127 TCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGC-ATAGAACAGATCACGAGC 93069 Query 63124 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 63183 ||| ||| || || || || ||| | || | || | | ||| || | ||| Sbjct 93068 TCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTCTGCATG 93009 Query 63184 CCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 63243 ||| ||||||||||| || || | | || || || || || || || ||||| | || Sbjct 93008 CCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCGACATA 92949 Query 63244 TCTAGCGGTGTTATTATAAACTCTCAACATTGG-AATAATACCATTGGATGTACCATTGG 63302 | ||| || || || |||| | | ||| || |||||| || ||||| ||| |||| Sbjct 92948 ACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGGAGTAACCGTTGG 92890 Query 63303 TCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63362 | || | || || |||||| |||||||| || ||| | || || || |||| Sbjct 92889 TGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCGCCTG 92830 Query 63363 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 63422 | | || |||||| || || ||| | ||| |||||||| || || || ||| | Sbjct 92829 CTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTT 92770 Query 63423 CCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 63482 || ||||| | || | ||||| |||||||||| ||||| || || |||||||||| Sbjct 92769 CCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATTAAATA 92710 Query 63483 AGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63542 | |||||| |||||| ||||| || ||||||| | | ||||| ||||||||||||| Sbjct 92709 AAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAGCTG 92650 Query 63543 AGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTT 63602 || ||||| | ||| || || | || |||||||| | || || ||||| | || Sbjct 92649 CATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGAGGACGTT 92590 Query 63603 CAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 63662 || | |||||| || || || | | ||| || || | ||||| |||||||| Sbjct 92589 CAGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGGTTTTGAAACCAAAGA 92530 Query 63663 AGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTT---GAGTTTATCCTTATA 63717 ||||||| ||||| || || || || || ||| | ||||| | | | | | |||| Sbjct 92529 AGTTGTACTTGAAA--TCACGGTCATAGATGATAGCAGAGTTCAAGCGGTCAGCGTTATC 92472 Query 63718 TTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGG 63777 || || || | || | | || || || || | ||||| || | || || Sbjct 92471 CATG---ACGACTTTGTACGTTTCATTAGAGATCATGGGTGAGTGTTTGCCTGTCTTGGG 92415 Query 63778 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 63837 ||| ||||| ||| | || || || || |||| | ||| | ||||| ||||| ||||| Sbjct 92414 ATTCACATAATTGTACAAGTCTTCGATTACTTGAGAAAAGACCTTTTTGGTTTCCTTGTG 92355 Query 63838 TAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 63897 ||||| || | ||| || | || || | | |||||||| ||||| | || || Sbjct 92354 AAGATTAGAAATGGCAATGCGCGCAGCCAACAGAGCATAATCAGGATGGCGAGTGGTCAT 92295 Query 63898 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATAT 63957 | || ||| |||| || || || | || | ||| || ||||| ||||| | |||| Sbjct 92294 ATAAGCAGCTGTTTCTGCAGCAAGGTTATCGAGTTCAACAGTTGTAACACCTTGGTATAC 92235 Query 63958 TCCTTGGATAACCT 63971 || |||||||| Sbjct 92234 ACCAGAGATAACCT 92221 Score = 114 bits (126), Expect = 2e-20 Identities = 279/421 (66%), Gaps = 5/421 (1%) Strand=Plus/Plus Query 61888 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 61947 ||| ||||| || || ||||| || |||| | ||||| |||||| || ||||| Sbjct 131511 ATAATACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAGTTT 131570 Query 61948 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62007 | | | | || || || || | ||||||||||||| ||| || || |||||||| Sbjct 131571 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCAATAAAGGCTCC 131630 Query 62008 CCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 62067 ||||| || ||||| | ||||| || |||||| ||| ||||| | || || || | Sbjct 131631 TCTGTCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTCTTGTATAG 131690 Query 62068 TCGCTTAATATCTTCTGGAAGGTTTGTATTCTGAATGGAT----CCACCATCTGCCATAA 62123 || | ||| || |||| | | | | | ||||| ||||||| || || | Sbjct 131691 CTTTTTGAGATCATCAGGAATGCCAGGAATACG-TTGGATACTACCACCATGAGCGATCA 131749 Query 62124 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 62183 || | |||||||| | |||||||||||| || | | | | || | |||| Sbjct 131750 TCATGTTCTTGATGTTATCATTCCATAAACCGAGTTCAATGAGGTCATTCAGTAAATGCT 131809 Query 62184 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 62243 | || |||| ||| ||||| ||| || | || || |||||||| || || || | Sbjct 131810 GGTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAG 131869 Query 62244 GTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62303 | || | | || ||||| ||||| |||||| ||| ||||| |||||||| || | Sbjct 131870 GCTCAAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAA 131929 Query 62304 C 62304 | Sbjct 131930 C 131930 >seq80 Length=87281 Score = 242 bits (268), Expect = 5e-59 Identities = 568/848 (67%), Gaps = 13/848 (2%) Strand=Plus/Plus Query 32372 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 32431 ||| || ||| ||||| ||||| || || || || || |||| | || || | || Sbjct 44259 TTGATAATCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 44318 Query 32432 CATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 32491 ||| || || |||||||||||| | | ||||| || | ||||| | || || | Sbjct 44319 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAG 44378 Query 32492 TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 32551 | ||| || || ||||| || || ||||| || | ||||| || || || Sbjct 44379 ACGATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGC 44438 Query 32552 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 32611 || |||||||| | || | ||||||||||||||| ||| || || || ||| Sbjct 44439 GACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATC 44498 Query 32612 TCTTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAAT 32670 | || ||||| || || | | || | | ||| |||| | | ||| || || | Sbjct 44499 CTTGACGCGTTCTTGGCTAGGACGCTTACGA-AGATGGGTAAATAAAAGACAAGCAAAGT 44557 Query 32671 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 32730 | || ||||| || || | || || ||||| ||| || || | |||||||| | Sbjct 44558 CAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCA 44617 Query 32731 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 32790 | ||||| ||||| |||||||| ||||| ||||| || ||||| ||||| || ||||| | Sbjct 44618 GACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGA 44677 Query 32791 CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGA- 32849 | || |||||||||| ||| | || || || || | ||||| ||||| Sbjct 44678 CAGCAGCAAAGGCAACAAGACGTTCAGCAAAAGAACCGTTAGAGGAAATCCA--TTTGAA 44735 Query 32850 -GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtt 32908 |||||||| ||||| | || | |||||| || || || |||||| |||||| | Sbjct 44736 GGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTC 44795 Query 32909 tttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAAT 32968 ||| || | | ||||| | ||| || |||||||||||||| || |||| | ||||| Sbjct 44796 TTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAAT 44855 Query 32969 GTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGT 33028 |||||||| |||||||| || ||||| ||| |||| || | ||||| ||||| Sbjct 44856 ATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATC 44915 Query 33029 ACAAAATCGTTCTG--CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 33086 |||||| ||| || | || |||||||| || || || || | ||||| || ||| Sbjct 44916 ACAAAA--GTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCC 44973 Query 33087 AATACATGTTTTATAAAATATTTTTCGTCT--GGTGTTAGT-TTATTCCAATCATTGATA 33143 || || | ||||| | ||||| | ||| | | || | |||||||| | Sbjct 44974 AAAACGCGAGAGATAAAGAAACGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGG 45033 Query 33144 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 33203 || || | ||| | |||||| |||||||||| || || || || || ||||| | Sbjct 45034 TCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAAT 45093 Query 33204 TTCCAGAT 33211 | |||||| Sbjct 45094 TGCCAGAT 45101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633627287362000