Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq57 132 4e-26 seq10 132 4e-26 seq24 102 7e-17 >seq57 Length=110979 Score = 132 bits (146), Expect = 4e-26 Identities = 159/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || || || | || || | ||||| ||||| ||| Sbjct 11440 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACGATTACTTTAGAAGTCGAGTCTTCT 11381 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| || || || |||||||| ||||| ||||| ||||| ||||| | Sbjct 11380 GACACTATCGA--CAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATC 11323 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | || ||||| || |||||| | ||||||| ||| || | |||| || | Sbjct 11322 AACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATA 11263 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| ||||| || || ||||| || || Sbjct 11262 ACATCCAAAAGGAATCTACTCTTCATTTGGTCCT 11229 >seq10 Length=205532 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || ||||||||| || ||||||||| | ||||| || | || || | ||||| || || Sbjct 110216 AAAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGAATC 110275 Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| | |||||| | |||||||| || ||||| ||||| || || ||||| Sbjct 110276 TTCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGA 110335 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||| | |||| ||||| || |||||| | || |||| ||| ||| || | || || Sbjct 110336 CCAACAGAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGACTA 110395 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || ||||| ||||| || || || || || || Sbjct 110396 CAACATCCAAAAGGAATCTACCCTTCACTTGGTCCT 110431 >seq24 Length=153386 Score = 102 bits (112), Expect = 7e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25077 AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCC 25136 |||||||| || ||||| ||||| ||||| ||||||||||| || |||| |||||| Sbjct 151940 AAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAACGTCTTATCTTTGCC 151881 Query 25137 GGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACG 25196 || |||||| | ||||| | ||| || || |||| || || || ||||| ||||| || Sbjct 151880 GGTAAACAACTCGAAGACGGTCGTACCTTGAGCGACTATAACATCCAAAAGGAATCTACT 151821 Query 25197 CTACATTTAGTGCT 25210 || || ||||| || Sbjct 151820 CTCCACTTAGTTCT 151807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433324857694925