Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq10 158 1e-33 seq57 156 4e-33 seq24 140 3e-28 seq118 127 2e-24 >seq10 Length=205532 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | |||||||| ||||| |||||||| || Sbjct 110449 ATACCACCACGAAGACGAAGGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCA 110390 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||||||| ||| ||||||||||||||||| |||| || | ||||||||| ||| Sbjct 110389 CTCAAAGTACGACCATCCTCAAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGA 110330 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||||||| || | | ||| | | || | |||||| Sbjct 110329 GGGATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCG 110270 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| |||||||| ||||| ||||| || || ||||| Sbjct 110269 ACTTCTAAAGTAATCGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCAT 110220 >seq57 Length=110979 Score = 156 bits (172), Expect = 4e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||| | |||||||| ||||| ||||| || ||| Sbjct 11211 ATACCACCACGGAGACGAAGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCG 11270 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | |||||| |||||| |||||||||||||| |||||||||| ||||| || ||| Sbjct 11271 CTTAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGA 11330 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||| |||||||||| | || | ||||| | || ||| Sbjct 11331 GGAATACCTTCCTTGTCTTGAATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCG 11390 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | ||| || || || || || || ||||| || |||||| Sbjct 11391 ACTTCTAAAGTAATCGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATG 11441 >seq24 Length=153386 Score = 140 bits (154), Expect = 3e-28 Identities = 134/172 (78%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | |||||| || | |||||||| ||||| ||||| || ||| Sbjct 151789 ATACCACCACGAAGACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCG 151848 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| |||||| ||||| ||||||||||| || |||| ||||| |||||||| ||| Sbjct 151849 CTCAAGGTACGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGA 151908 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGG 114324 ||||| ||||| ||||| ||||||||| || | | |||| |||||||| Sbjct 151909 GGAATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGG 151960 >seq118 Length=67844 Score = 127 bits (140), Expect = 2e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| || || | |||||||| ||||||||||||||||| Sbjct 19125 ATACCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCA 19066 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| |||||| ||||| ||||||||||| ||| | |||||||| ||||| || ||| Sbjct 19065 CTCAAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGA 19006 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTC 114322 || || ||||| || || |||||||| || | | |||| |||||| Sbjct 19005 GGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTC 18956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131353369140