Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq15 113 9e-20 seq80 96.9 7e-15 >seq15 Length=177086 Score = 113 bits (124), Expect = 9e-20 Identities = 484/760 (64%), Gaps = 14/760 (2%) Strand=Plus/Minus Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 ||||| ||| ||||| || || || || | | | ||| | ||||| || || || || Sbjct 93437 GGCCAAGTTACAGACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAG 93378 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 ||| ||||||||||| || |||| || || ||||| ||| ||| || || ||||| Sbjct 93377 GTTGCTGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTT 93318 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||||| ||||| || || ||||| || || | | | | | ||| || | Sbjct 93317 ATAGAGTATGAATGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTT 93258 Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926 |||||||| || | ||| | || || ||||| || || || | Sbjct 93257 TTGAGCCTTGATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAAC 93198 Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGG-GCACGACGCCGGGCACATGAGACTCC 244985 || ||| |||||||| || | || || || || | ||||| | ||| || Sbjct 93197 AAATTCGTCACCCCAGACTTCATGTAATCCAGGAGCTTCATTG-GGGCAAAATAGAGACC 93139 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 | || || ||||| |||| | ||||||||| || || || | |||||| || | ||| | Sbjct 93138 AATCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACA 93079 Query 245046 GGTCCCTGGTCCTCTGCT--CGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 | || | | ||||| | |||| ||| ||| || | || || |||||| || Sbjct 93078 GATCACGAG--CTCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAA 93021 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 | ||| | |||||||| |||| ||| | |||| ||||| || ||||| || || || Sbjct 93020 AATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCC 92961 Query 245164 CTGGTCCACCATCCTCTCGAGCGC----GTTGAAGATGCGCAGGGTAGGCACTATGCCGT 245219 || || || | ||||| |||||| | || || | |||| || |||| Sbjct 92960 TTGATCGACA----TAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGT 92905 Query 245220 TAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACA 245279 | |||| ||||||||||| ||||| | || | | | | |||| ||| || Sbjct 92904 TGGAGTAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCA 92845 Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339 ||| | ||||| || ||||||||| | || ||| | |||| || || || | Sbjct 92844 AGCCAATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATAC 92785 Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399 | || || || ||||||| |||||| || || || |||| ||||| || Sbjct 92784 CTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTG 92725 Query 245400 TGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 ||| | || || | ||| || || ||||| |||||||| Sbjct 92724 TGCCTGCATTAAATAAAGTAGGACTAGCGTGTGTAAAGTA 92685 >seq80 Length=87281 Score = 96.9 bits (106), Expect = 7e-15 Identities = 349/535 (65%), Gaps = 22/535 (4%) Strand=Plus/Minus Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAG 42677 || || || || || || || ||||||| ||||| || ||||| |||| ||||| Sbjct 44780 GCTATTGACACTATCCCTTGTATCAAGAGAAAGGCTGATTGGGCCTTCAAATGGATT--- 44724 Query 42678 AGTCCCG--ACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCT 42735 ||| ||| | || | || | || || |||||| | || ||||| || |||| Sbjct 44723 --TCCTCTAACGGTTCTTTTGCTGAACGTCTTGTTGCCTTTGCTGCTGTCGAAGGTATCT 44666 Query 42736 TCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGT-GTC-GATGCCCGG 42793 ||||||| || |||| || |||||||| |||||||| | || || ||| ||||||||| Sbjct 44665 TCTTCTCTGGTTCCTTTGCTTCCATCTTTTGGCTCAA--AAAACGTGGTCTGATGCCCGG 44608 Query 42794 ACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTG 42853 | || ||| || ||| | ||| | | || || || || |||| |||||||| || Sbjct 44607 TTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTTCATACTGACTTTGCTTG 44548 Query 42854 CCTCCTGTTCTCGAGCCACCTCAGGCACAAGC--CCTCG-AAGGAGCGGGTCCGGGCCAT 42910 || || | | ||| || | |||| ||| | | || || ||| || || Sbjct 44547 ---TCTTTTATTTACCCATCT---TCGTAAGCGTCCTAGCCAAGAACGCGTCAAGGATAT 44494 Query 42911 CATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCT 42970 |||| ||| || || || || | || || | ||| | | || ||||| | || Sbjct 44493 CATCTTGGAAGCTGTCAGCATTGAACAAGAATTTTTGACGGATGCTCTTCCCGTCGCTCT 44434 Query 42971 GGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT 43030 ||||||||||| | | | ||||| |||||||| | | ||| || || | |||| | Sbjct 44433 CATCGGCATGAACTCTGCCTTGATGTGTCAGTACATCGAATTCGTTGCTGATCGTCTCAT 44374 Query 43031 -GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGA 43089 || | ||| | || | | |||| | | || || ||||||||||| | Sbjct 44373 GGTTGCTCTTGGAT-TCGACAAGATTTACATGGCTACCAATCCATTTGACTTTATGGACA 44315 Query 43090 ACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||| | | |||||||||||||| || || ||||| ||| | || || || Sbjct 44314 TGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCTGATTATCA 44260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944332176477200