Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq9 104 2e-17 >seq9 Length=217876 Score = 104 bits (114), Expect = 2e-17 Identities = 262/402 (65%), Gaps = 21/402 (5%) Strand=Plus/Minus Query 20203 ATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATA 20262 ||| |||| || || || || || || || |||| | || ||||| |||| ||| Sbjct 9076 ATCGCCCATTGTATGTATGAATTCACCAGGATCAAGATCTGTTACATGCGCAATCATGCG 9017 Query 20263 AGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCT 20322 || || || | ||| |||||| || |||||||| |||| ||||| || | || | Sbjct 9016 TGTCAAAAGTGCATAAGAGGCAATATTGAAAGGAACACCCAGTCCCATATCACAAGAACG 8957 Query 20323 CTGATACAGCTGACAGGAAAGCT---------CACCGTC------------AGCTACATA 20361 ||||| ||| ||| || | || | || || || |||||| Sbjct 8956 TTGATAAAGCACACAAGACAACTTGGCACGTCCGCCATCCTGAGGTGGATTAGATACATA 8897 Query 20362 AAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 ||||||||| || ||||| ||||| | ||||| | | | || || |||||||| Sbjct 8896 AAATTGACAAAAGGCATGACAAGGCGGTAAAGCCATGATAGGAATATCTGCAGGGTTCCA 8837 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGA 20481 || ||| ||||||||| | ||| ||||| |||||||| || | | | Sbjct 8836 TGCTGACAGAATGATTCTGCGATCAGTAGGATTGTTTTTTATAGTGTCGATCACTTGTTG 8777 Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541 ||||| |||| || || |||||||| |||| ||| || ||||| || ||||| Sbjct 8776 TAATTGATCAATGCCTTGCCCTGTATAATCAGTATCACAATCAACGTATTTGGCACCAAA 8717 Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583 ||| ||||| || || ||||| || ||||| | ||| || || Sbjct 8716 GTGTCTCCATTGAAATCCGTAGACTGGTCCAAGATCACCTTC 8675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441369517289800