Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq80 109 1e-18 >seq80 Length=87281 Score = 109 bits (120), Expect = 1e-18 Identities = 166/237 (70%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| | | | ||| ||| || ||||||||||| ||||||||| || | Sbjct 44432 ATCGGCATGAACTCTGCCTTGATGTGTCAGTACATCGAATTCGTTGCTGATCGTCTCATG 44373 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 || || || | || || | |||| | | ||||| || | ||||||||| | Sbjct 44372 GTTGCTCTTGGATTCGACAAGATTTACATGGCTACCAATCCATTTGACTTTATGGACATG 44313 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCT 269331 || || || |||| ||||| |||||||| |||||||||||| || ||||||||| || Sbjct 44312 ATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCTGATTATCAACGTGCT 44253 Query 269332 GGTGTAATGA------ATCCAGAAGACAATATTTTTGCCATCGATGATGATTTTTAA 269382 ||||| |||| | || | || || | |||| || | |||| |||||| ||| Sbjct 44252 GGTGTCATGAACAAGCAGCCTGCTGAAAAGACTTTTACCTTAGATGCTGATTTCTAA 44196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179645406978410