Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq58 145 2e-29 seq98 143 6e-29 seq80 129 1e-24 seq25 87.8 4e-12 >seq58 Length=110453 Score = 145 bits (160), Expect = 2e-29 Identities = 1015/1604 (63%), Gaps = 93/1604 (6%) Strand=Plus/Minus Query 332805 TGACTAATGATCACGACACCTCCACCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGA 332864 ||| ||| ||| || ||||| |||||| | | ||| | || |||| || || ||| Sbjct 27568 TGAGTAACGATGACAACACCACCACCATATTCCTTGATAGCAGTAGCCAAAGCACCAAGA 27509 Query 332865 CTCTCACGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGT-TGTTGCCA 332923 ||||| || | |||| || |||||||| | ||| | || ||| ||| |||| ||| Sbjct 27508 GATTCACGATCCAAATAGTTAGTAGGTTCGTCAAGAACAAGCATGTGAGGTCTGTT-CCA 27450 Query 332924 TAGAGCAGCGCCGATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGA 332983 | |||||| || || ||||| || | |||||| || ||||| |||||||| || ||||| Sbjct 27449 CATAGCAGCACCAATGACCAACTTGACCTTTTGACCACCAGAGAGACCACGGATACGAGA 27390 Query 332984 ATGAGTTGTAAATTCAGGGTCGAGACCAACATTTGCCATATGTTCTTCCACGTTCTTTGC 333043 ||||| | ||||| || || |||||||| | |||| || | ||| | | ||| || Sbjct 27389 GTGAGTGGCGAATTCGGGTTCAAGACCAACTTCAGCCAAGTGCTTTTCAATTTCCTTGGC 27330 Query 333044 GGTCAGTGGCTTGAACATACCGTTTGCGACGGCTTCTTTGGTGTCAATGTCGTTCAGAAG 333103 |||| || | | ||| | | | ||||| | || | ||||| | Sbjct 27329 AGTCAAAGGACGGTTGAGACCCATCTTGGCAGCTTCAGCAGCATCGAC----TTCAGCAA 27274 Query 333104 TTTTC----CGAAACCATACTCCTCGAGGCGTTCG--CGAGATATCCATTGGGTAGTCTC 333157 | ||| ||||||| || || || || | ||||| ||||| ||| | || Sbjct 27273 TCTTCTTACCGAAACCCATTTCTTCAAGC--TTGGAACGAGAGATCCA---GGTGTTGTC 27219 Query 333158 ATC-GTTTTTCCACTGAACC--------TCGTACTCGTAAGATTTTTTCAGCTTGCGGCG 333208 | | | | || || || ||||| ||||| |||| || ||||| || || Sbjct 27218 AACAGAGGAGCGACCGACCCAAGAGACTTCGTATTCGTAGGATTGCTTGAGCTTACGACG 27159 Query 333209 ACCAAGAATCTTGTCAAGAA-----TTTTC---TTCACTCCGTCAACGACTTTAGTGTCA 333260 ||||| ||| |||| | ||||| |||| || ||| ||||| || Sbjct 27158 ACCAACAATAGCTTCAACGACACGCTTTTCACCTTCAATCA--CAAAGACTT----GT-- 27107 Query 333261 TACATCTTCTTTAGTTCTTCTTCGTTGTTCTTCCTAGAAACGACGTCAAGGGTCTCTTT- 333319 | || |||| | | ||||||| ||| || | | | | | || |||| Sbjct 27106 TCCAAGGCCTTTTGGTTTTCTTCGGCGTTGTTAC--GTTCGTTCTTTTCGAGT-TCTTCA 27050 Query 333320 --GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGA 333377 ||||||||||| | |||||||||||||| || | |||||| || |||| | ||| Sbjct 27049 CGGTCTTCACCGGTGTGGTAACGCCATTGGATGTATTCGTTGGGAGTTTTGTCCAAGTGA 26990 Query 333378 TCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 333437 |||||||||||||||||||| || || ||||| |||| ||||| || ||||| || Sbjct 26989 CGTTCGATGTGGTGGAAAGCATGTTGAGCGACGTAGGCAATACGCAAGTTAGGATGTCTC 26930 Query 333438 CAAACACTTCCGTTGGTGGCTTCCATTTGCCCCGTGAGCACCTTAATGAGAGTGCTTTTT 333497 || ||| | || | ||| |||| || || | || ||| || | || || Sbjct 26929 CAGACAGTACCAACCTCAGATTCGATTTCACCAGTCAACAACTTGATCAAGGTAGACTTA 26870 Query 333498 CCCGCACCATTTTCGCCTACCACACCAATCCTGGAGTTCAGCGATACCTGGGCATTCACG 333557 || ||||| || || | || ||| | ||| || || || | |||| | | Sbjct 26869 CCAGCACCGTTGGGACCAATGACGGCAACACGAGAGGCAAGAGA-ACAT-TGCATGGA-G 26813 Query 333558 TTGTCAAAGATTAGTTT---TTCCGTACCCGGATACTTGAACCCCACACCGCGTAGCTTC 333614 | || | | | | || || | ||| || || | ||| | || | |||| Sbjct 26812 ATATCGATCAATTGCTTGCGGTCAGAACCAGGGTATTGGAAGTCGACGTTCTTCATCTTC 26753 Query 333615 ATGATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCAC 333674 | ||| ||||| ||||| | ||||||| || | | | || || || ||||| || Sbjct 26752 AAGATAGCACGTTCCTTAGTCTTGATACCTTCCAAGTAACCAGGTTCAGGGAAAGAGAAC 26693 Query 333675 GTGGTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAAC 333734 || | | || | | || ||||||| || | ||| |||||| ||||| Sbjct 26692 TTGATTTGAGTAGCTTCCAAGGAGTAGTAAGAGGCAGCACGAGGAACCTTCTTGACGAAT 26633 Query 333735 TCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAG 333794 || |||| || ||||| || ||| ||||| ||| |||||||| || || || | Sbjct 26632 TCAGACAAGTTACCCTTATAACGCTTGAGCTTGTAGTTGGGTTCGTAGTGAATGATGTCG 26573 Query 333795 GTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTA 333854 | || ||| ||| | ||| || |||||||| || ||||| | | | | ||| ||| Sbjct 26572 GAACAGACATGGTCCAAGAAACCAGAGTCGTGGGAGACAATGATGGAGGTAACAGTCTTC 26513 Query 333855 AGGTTGATCAGGTA----TTCAATCAGCCACCTCACGTTAGAC-ACAGAAAGATGGTTGG 333909 | | ||||| | ||| ||| || ||||| ||| ||| | || |||| Sbjct 26512 AAACCAAGGAGGTAGTTCTCCAACCAGGCA----ACGTT-GACAACATCCAAGTGATTGG 26458 Query 333910 TCGGCTCGT-CAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGT 333968 | || |||| ||| ||| || | | ||||||| | ||| ||||| |||||||| || Sbjct 26457 TAGGTTCGTCCAACAAG-AGGATATCAGCGTTCATCAACATGGCACGGGCAAGAGCAAGC 26399 Query 333969 TTCATTTTCCACCCTCCTGAAAGAGTGTT----AATTGGGGCAGATTGGCGCTCAAT--A 334022 ||||| ||||| || || |||| ||| ||| | || |||| || | Sbjct 26398 TTCATCTTCCAACCACC----AGAGAGTTCACCAAT--AGACATCTTGGTAACCATTTGT 26345 Query 334023 TCAAAGCCAACCGATT-CTAGAGTA-GTTACGATCTTTTCACGAGACCAAATGTTTTCCT 334080 ||| || | | ||| | |||| | ||||| | || | || | | || || Sbjct 26344 TCAGAGAAACCATATTCCAAGAGAATCTTACGGAC-TTCCTCGGGGTC----CTTGGTCT 26290 Query 334081 TTACTTGTTCATCATTGGCA---ATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGT 334137 || | || |||| |||||||||| | || | | || ||||| || | Sbjct 26289 CAAC---ACCCTCGGAGGCAAGGATGAAGTCAACCAAAGGAGTATCAGCCTCGGAACCAT 26233 Query 334138 CGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCT 334197 | | ||||||||| ||||| |||| || | || || ||||| ||||| | || Sbjct 26232 CAATATCGTGTTCGACGTAGACAGTCTTGAGCTCAGAACGAGGAGGGAAGCCTTCGACCT 26173 Query 334198 GACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGAC 334257 | |||| |||| || ||||| ||||| || ||||| || || | ||||| |||| Sbjct 26172 GTTCGTTGGCAATGGCACGCATAAGAGTAGACTTACCACAACCATTGGCACCACAGAGAC 26113 Query 334258 CGTAGCGGTTTCCACGCTTCAGATTGAACCG-CGTATTGTTCAGAAGAATTTTTCCACCA 334316 | || || |||||||| ||| ||| | ||| ||| || | || || ||||| Sbjct 26112 CATAACGACGACCACGCTTGAGA-CGAAGAGAGGTACGGTTAAGCAAGATCTTGGCACCA 26054 Query 334317 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACCGACTTC 334360 || || ||||| |||||||| | ||| ||||| ||||| |||| Sbjct 26053 TAAGCAAGAGAGAATTCACAGTTACAGAGATCTTCACCTTCTTC 26010 >seq98 Length=79831 Score = 143 bits (158), Expect = 6e-29 Identities = 679/1057 (64%), Gaps = 49/1057 (5%) Strand=Plus/Minus Query 333321 TCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCC 333380 |||||||||| | ||||||||||| || || | |||||| || |||| | ||| Sbjct 36221 TCTTCACCGGTGTGGTAACGCCATTGAATGTATTCGTTGGGAGTTTTGTCCAAGTGACGT 36162 Query 333381 TCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAA 333440 |||||||||||||||||||| || || ||||| |||| ||||| || ||||| |||| Sbjct 36161 TCGATGTGGTGGAAAGCATGTTGAGCGACGTAGGCAATACGCAAGTTAGGATGTCTCCAG 36102 Query 333441 ACACTTCCGTTGGTGGCTTCCATTTGCCCCGTGAGCACCTTAATGAGAGTGCTTTTTCCC 333500 ||| | || | ||| |||| || || | || ||| || | || || || Sbjct 36101 ACAGTACCAACCTCAGATTCGATTTCACCAGTCAACAACTTGATCAAGGTAGACTTACCA 36042 Query 333501 GCACCATTTTCGCCTACCACACCAATCCTGGAGTTCAGCGATACCTGGGCATTCACGTTG 333560 ||||| || || | || ||| | ||| || || || | |||| | | | Sbjct 36041 GCACCGTTGGGACCAATGACGGCAACACGAGAGGCAAGAGA-ACAT-TGCATGGA-GATA 35985 Query 333561 TCAAAGATTAGTTT---TTCCGTACCCGGATACTTGAACCCCACACCGCGTAGCTTCATG 333617 |||| | | | || || | ||| || || | ||| | || | ||||| | Sbjct 35984 TCAATCAATTGCTTGCGGTCAGAACCAGGGTATTGGAAGTCGACGTTCTTCATCTTCAAG 35925 Query 333618 ATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTG 333677 || ||||| ||||| | ||||||| || | ||| || || || ||||| || || Sbjct 35924 ATAGCACGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGTTCAGGGAAAGAGAACTTG 35865 Query 333678 GTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCG 333737 | | || | | || ||||||| || | ||| |||||| ||||| ||| Sbjct 35864 ATTTGAGTAGCTTCCAAGGAGTAGTAAGAGGCAGCACGAGGAACCTTCTTGACGAATTCG 35805 Query 333738 GACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTG 333797 |||| || ||||| || ||| ||||| ||| |||||||| || || || || Sbjct 35804 GACAAGTTACCCTTATAACGCTTGAGCTTGTAGTTGGGTTCGTAGTGAATGATGTCGGAA 35745 Query 333798 CAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGG 333857 || ||| ||| | ||| || |||||||| || ||||| | | | | ||| ||| | Sbjct 35744 CAGACATGGTCCAAGAAACCAGAGTCGTGGGAGACAATGATGGAGGTAACAGTCTTCAAA 35685 Query 333858 TTGATCAGGTA----TTCAATCAGCCACCTCACGTTAGAC-ACAGAAAGATGGTTGGTCG 333912 | ||||| | ||| ||| || ||||| ||| ||| | || ||||| | Sbjct 35684 CCAAGGAGGTAGTTCTCCAACCAGGCA----ACGTT-GACAACATCCAAGTGATTGGTAG 35630 Query 333913 GCTCGT-CAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTC 333971 | |||| ||| ||| || | | ||||||| ||||| ||||| |||||||| || ||| Sbjct 35629 GTTCGTCCAACAAG-AGGATATCAGCGTTCATCAGCATAGCACGGGCAAGAGCAAGCTTC 35571 Query 333972 ATTTTCCACCCTCCTGAAAGAGTGTT----AATTGGGGCAGATTGGCGCTCAAT--ATCA 334025 || ||||| || || |||| ||| ||| | || |||| || | ||| Sbjct 35570 ATCTTCCAACCACC----AGAGAGTTCACCAAT--AGACATCTTGGTAACCATTTGTTCA 35517 Query 334026 AAGCCAACCGA---TTCTAGAGTA-GTTACGATCTTTTCACGAGACCAAATGTTTTCCTT 334081 || |||| | | | |||| | || || | || | || | | || || Sbjct 35516 GAG--AACCCATATTCCAAGAGAATCTTGCGGAC-TTCCTCGGGGTC----CTTGGTCTC 35464 Query 334082 TACTTGTTCATCATTGGCA---ATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTC 334138 || | ||| |||| |||||||||| | || | | || ||||| || || Sbjct 35463 AAC---ACCCTCAGAGGCAAGGATGAAGTCAACCAAAGGAGTATCAGCCTCGGAACCATC 35407 Query 334139 GAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTG 334198 | ||||||||| ||||| |||| || | || || ||||| ||||| | ||| Sbjct 35406 AATATCGTGTTCGACGTAGACAGTCTTGAGCTCAGAACGAGGAGGGAAGCCTTCGACCTG 35347 Query 334199 ACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACC 334258 |||| |||| || ||||| ||||| || ||||| || || | ||||| ||||| Sbjct 35346 TTCGTTGGCAATGGCACGCATAAGAGTAGACTTACCACAACCATTGGCACCACAGAGACC 35287 Query 334259 GTAGCGGTTTCCACGCTTCAGATTGAACCG-CGTATTGTTCAGAAGAATTTTTCCACCAT 334317 || || |||||||| ||| ||| | ||| ||| || ||||| || |||||| Sbjct 35286 ATAACGACGACCACGCTTGAGA-CGAAGAGAGGTACGGTTAAGCAGAATCTTGGCACCAT 35228 Query 334318 ATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 | || ||||| |||||||| | ||| ||||| ||||| Sbjct 35227 AAGCAAGAGAGAATTCACAGTTACAGAGATCTTCACC 35191 >seq80 Length=87281 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || || ||||||||||||| | ||| | ||||||||||||||||| || || || | Sbjct 44435 CTCATCGGCATGAACTCTGCCTTGATGTGTCAGTACATCGAATTCGTTGCTGATCGTCTC 44376 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | || ||||| | || || | |||| | | || || |||| ||||||||| Sbjct 44375 ATGGTTGCTCTTGGATTCGACAAGATTTACATGGCTACCAATCCATTTGACTTTATGGAC 44316 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 | || || |||||||| || || |||||||| |||||||||||| |||||||||||| Sbjct 44315 ATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCTGATTATCAACGT 44256 Query 243742 CCTGGTGTGATGAA 243755 ||||||| ||||| Sbjct 44255 GCTGGTGTCATGAA 44242 >seq25 Length=151245 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 333320 GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATC 333379 ||||||||| | ||||||||||| || ||||| | ||| || ||| | || | || | Sbjct 145367 GTCTTCACCAGTAGCATAACGCCACTGAATATATTCGTTTGGCGTCTTATCCAAGTGCTG 145426 Query 333380 CTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 333439 |||||||| ||||| || || || || || || |||| ||| | ||| ||||||||||| Sbjct 145427 TTCGATGTGATGGAAGGCGTGTTGAGCAACATAGGCAATACGTAAATTGGGATGCTTCCA 145486 Query 333440 AAC 333442 || Sbjct 145487 CAC 145489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102871592263250