Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq15 196 6e-45 seq297 116 4e-21 seq80 96.9 4e-15 >seq15 Length=177086 Score = 196 bits (216), Expect = 6e-45 Identities = 877/1373 (64%), Gaps = 36/1373 (3%) Strand=Plus/Minus Query 113948 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTG 114007 |||| ||||| || ||||| || |||||| ||| | ||||| | |||||||| || Sbjct 93964 TTGGATGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTA 93905 Query 114008 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGG 114067 ||||| || || | || || |||||||| ||| | | ||| ||||||||| Sbjct 93904 GGCATAGGAGCAACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGT 93845 Query 114068 GCGTCCCAGTCGTAG---TTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGA 114122 ||| ||||||| | ||| || | || | | |||||| || | || |||| Sbjct 93844 GCGGCCCAGTCCCAAAGATTGGTAGGTGTGACA-----TTCCACATGTCGTATTGCAGGA 93790 Query 114123 TACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT 114182 |||| | ||| | || || ||| | || ||||| || || | || ||||| | Sbjct 93789 TACCCTTGGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACT 93730 Query 114183 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 114242 || | || || | ||| || || || || || ||||| || || |||| || Sbjct 93729 CGCAAGAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCT 93670 Query 114243 TGGCCTCGTCGGAATCAAACGCGA----GTCGGCACAAAATAAATACATCCGCGAGACCT 114298 |||| || ||||| || | || | || || | || | || || | |||| Sbjct 93669 TGGCTTCTGGTGAATCGAATG-GATAACGAAGGGCCATGA-AAGTG--TCGGCTAAACCT 93614 Query 114299 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCCACGGG 114357 || ||||| | ||||| || | ||||||| | || || |||||| || || || Sbjct 93613 TGAACACCTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCG-GCTTCGATGACAGG 93555 Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417 ||| |||| |||| || | | | || | ||| | |||| |||||| || | || || Sbjct 93554 ATAGTAATTGATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTG 93495 Query 114418 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGA---CATACTTAGGAAGGGCGAT 114474 || |||| | ||||| | | ||||| ||||| |||| |||| || || || Sbjct 93494 CAGTTTTTGGAAATCATACTTT----TCTCT--ATTGATCACATAGGTAGGTAGAGCAAT 93441 Query 114475 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 114534 || |||| ||||| |||| | ||||| | | ||| || | |||||| ||||| Sbjct 93440 GGAGGCCAAGTTACAGACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACA 93381 Query 114535 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 114594 || || | ||| || || |||||||| | ||||| |||| ||||||| ||||| Sbjct 93380 CAGGTTGCTGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATC 93321 Query 114595 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA- 114653 ||| || || ||| |||| | || ||||||||||| | || | ||| || | ||| | Sbjct 93320 CTTATAGAGTATGAATGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAG 93261 Query 114654 CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGG 114713 | | | | || | | || | | |||| || || ||||| ||| ||||| | Sbjct 93260 CTTTTGAGCCTTG-ATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAG 93202 Query 114714 CTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAG 114773 | |||| || |||||| | | || | || || || | || ||||| || |||| Sbjct 93201 CAACAAATTCGTCACCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAG 93142 Query 114774 ACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGA 114833 |||| | |||||| || ||||||| |||||| || || || | ||||||||| ||| Sbjct 93141 ACCAATCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGA 93082 Query 114834 AGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 114893 | ||||| ||| | ||| || | || || ||||| || |||||| | Sbjct 93081 ACAGATCACGAGCTCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGA 93022 Query 114894 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAG 114950 || || || ||||| ||||||| ||||| |||| || ||| ||| | ||| Sbjct 93021 AAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGC 92962 Query 114951 CCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGG-AATGATACCATCA 115009 | || | ||||| | || || || || || || ||||| || ||| || || | Sbjct 92961 CTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTG 92903 Query 115010 GATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATA 115069 || | || || || || ||| || | | || | | | || |||| || Sbjct 92902 GAGTAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAG 92843 Query 115070 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCG 115129 |||||||| ||||| ||| |||||||| || || |||| | | ||||| || Sbjct 92842 CCAATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCT 92783 Query 115130 TCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 115189 |||||||| || |||| | | || | ||| || |||||||| || | ||||| Sbjct 92782 TCGATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTG 92723 Query 115190 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAG 115249 || || || || | || || | ||||| | || | || |||||| | ||| Sbjct 92722 CCTGCATTAAATAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTAT 92663 Query 115250 GTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302 ||||| | | || ||| || || || |||||||||| || ||||| Sbjct 92662 GTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCAT 92610 >seq297 Length=22619 Score = 116 bits (128), Expect = 4e-21 Identities = 208/304 (68%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 172599 AGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCA 172658 ||| ||| | || | ||| |||||||| || ||||||||||| | ||| ||| |||| Sbjct 8981 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 9040 Query 172659 TAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATACTCCTTACCCTGTTGAA 172718 | ||||| | |||||||| || | ||| |||| || ||||| ||||| || |||| Sbjct 9041 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 9100 Query 172719 GACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAG 172778 |||| | || ||||| || || | |||| || |||||| || ||| Sbjct 9101 GACCAAGAATAGCCTTGATATTTTTTATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 9160 Query 172779 CATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAA 172838 |||| ||||| || || ||||| | ||||| ||||| |||| |||||||||| Sbjct 9161 CATCACGGACGTTCAGCAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 9220 Query 172839 CCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCG 172898 | || || | |||| | | || | ||| || |||||||| || || | ||| || | Sbjct 9221 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTAATGATCAGAG 9280 Query 172899 TACA 172902 |||| Sbjct 9281 TACA 9284 >seq80 Length=87281 Score = 96.9 bits (106), Expect = 4e-15 Identities = 181/262 (69%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || ||||| || ||||| |||| | |||||| ||| || || ||||| ||||| Sbjct 44563 TGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAGACCA 44622 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 || || || | ||| || || | | ||| ||||| ||||||||||| || || ||| Sbjct 44623 CGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGACAGCA 44682 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || |||| ||||| |||||||| || | || || | | || ||| || | ||| Sbjct 44683 GCAAAGGCAACAAGACGTTCAGCAAAAGAAC-CG--TTAGAGGAAATCCATTTGAAGGCC 44739 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTT 126298 || | |||||| ||| |||||| |||| || | || || |||||| | || || Sbjct 44740 CAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAG--CATTTCTT 44797 Query 126299 TCTGATGG--ATCTTTGATGTA 126318 ||| ||| |||||||| || Sbjct 44798 TCTCTTGGTTGTCTTTGATATA 44819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349157182600