Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq202 84.2 2e-11 seq10 84.2 2e-11 >seq202 Length=41706 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| | ||| | ||| |||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 27652 TCTCTTTGGCGGGGAATTGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTAACCACT 27593 Query 57066 ATACTACCGAGGATTG 57081 |||||||| | ||||| Sbjct 27592 ATACTACCAAAGATTG 27577 >seq10 Length=205532 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||| ||| || ||| || | || || || || |||||||| || Sbjct 110410 TCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCAAGTTGTTTACCAGCAAAG 110351 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || |||| ||| ||||| | || | | |||||||| || ||||| |||| | Sbjct 110350 ATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTT 110291 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | | || ||||| || || | || || || ||||| || || |||||||| Sbjct 110290 TCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTGCCGGTAAGAGTCTTTACG 110231 Query 42198 AAGATTTGCATTTT 42211 |||||||||||||| Sbjct 110230 AAGATTTGCATTTT 110217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543208759854800