Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq10 120 3e-22 seq15 107 2e-18 seq118 98.7 1e-15 >seq10 Length=205532 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||| |||||||| || | || || | || ||||| || Sbjct 110422 TGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCAAGTTGT 110363 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || ||| | || || | ||| ||||| ||||| || ||||| || ||||| || ||| Sbjct 110362 TTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTT 110303 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||||| ||| || | ||||| | || ||||||| ||| | ||||||||||| Sbjct 110302 TGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTGCCGGTA 110243 Query 64421 AAAGTTTTTACGAAAATTTGCATTTT 64446 | ||| |||||||| ||||||||||| Sbjct 110242 AGAGTCTTTACGAAGATTTGCATTTT 110217 >seq15 Length=177086 Score = 107 bits (118), Expect = 2e-18 Identities = 359/548 (66%), Gaps = 23/548 (4%) Strand=Plus/Minus Query 154905 ACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGC-CT--TT 154961 || || | ||| || | ||| || ||||| | ||| || |||| |||||| || || || Sbjct 93121 ACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACAGATCACGAGCTCTGATT 93062 Query 154962 TTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAA--TCATATATGTCGGCGTGCC 155019 | ||||| | | | |||||| || || ||||| | | | ||||| || |||| Sbjct 93061 TCGTCTTTACCAAAGTTTTTTCGC----AAGTCTAAAAAGGTGAAA-ATGTCTGCATGCC 93007 Query 155020 ACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTTT---CCTCCTTGATCCACGTGAC 155076 | || || || || | || | ||||| || || || |||||||| || | || Sbjct 93006 AGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCGACATAAC 92947 Query 155077 GCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGC 155136 | | ||| ||| | || || | || || | ||| ||| |||||||||| Sbjct 92946 GAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAGTAACCGTTGGTGC 92887 Query 155137 C----ACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAAACCTCC- 155191 | | |||| | | || | |||||| || |||| || | ||| | ||| || Sbjct 92886 CGGCAATGTAT---GAT-CCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCGCCT 92831 Query 155192 GCCGTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTC 155251 || || || || ||||| |||||| | || || || || |||| ||| || Sbjct 92830 GCTGTCTTG-GAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATC 92772 Query 155252 TTCTTTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAA 155311 ||| |||| || | ||||||||| ||||| | ||| || |||| ||| || ||| Sbjct 92771 TTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATTAAA 92712 Query 155312 TAATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGC 155371 ||| |||||||||||||||||||| | | | | | |||||||| || || || || Sbjct 92711 TAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAGC 92652 Query 155372 GGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCG 155431 || ||||| || || || ||||||||||| || ||||| | || |||||| || Sbjct 92651 TGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGAGGACG 92592 Query 155432 CTCCGCAA 155439 || |||| Sbjct 92591 TTCAGCAA 92584 >seq118 Length=67844 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||||||||||||||| | ||| || ||||||| || || Sbjct 19098 TGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCGAGTTGT 19039 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || ||||| ||||||| || || || || ||||| || ||||| || ||||| || ||| Sbjct 19038 TTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTTT 18979 Query 64361 TGCTTTACA 64369 ||||| ||| Sbjct 18978 TGCTTGACA 18970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499641083891800