Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq15 98.7 1e-15 >seq15 Length=177086 Score = 98.7 bits (108), Expect = 1e-15 Identities = 419/654 (64%), Gaps = 6/654 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | | ||||| |||||||| || ||| || ||||| |||||||| || ||| Sbjct 92520 AAGTACAACTTCTTTGGTTTCAAAACCCTCGAGCGTTCTTACCTTCTCAAGATTGACGGC 92579 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || | || || || || || || | ||||| || || ||||| || || || | Sbjct 92580 AAGATTGCTGAACGTCCTCAACATTTGATCATGCGTGTTGCGATCGGTATCCATGGAACC 92639 Query 93835 GACAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGG-TATACCATGG 93892 || || | | | | ||| | | | || ||| || |||| | ||| | Sbjct 92640 GATATTGATGCAGCTATTGAGA-CATACAACTTGATGTCTGA-AAGATACTTTACACACG 92697 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | | || || | || || || || || || || || |||||||| |||||| || Sbjct 92698 CTAGTCCTACTTTATTTAATGCAGGCACACCTCGTCCCCAAATGTCTTCTTGTTTCTTGC 92757 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 | || | |||| || || ||| || || | || | ||||| |||||| | Sbjct 92758 TCACCATGAAGGAAGATTCGATCGAAGGTATCTATGAGACGCTCAAAATCTGTGCTCAAA 92817 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || || || || || || | | | ||| || | ||||| || || || | Sbjct 92818 TCTCCAAGACAGCAGGCGGTATTGGCTTGAACATTCACAACATTCGTGCTAGTGGATCAT 92877 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| ||| ||||| || ||||||||| | | || |||||||| || ||||||| Sbjct 92878 ACATTGCCGGCACCAACGGTTACTCCAACGGATTATTGCCCATGCTCCGTGTTTTCAACA 92937 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 | |||| || || || || || || ||| | | | ||| | ||||| | || Sbjct 92938 ATACGGCTCGTTATGTCGATCAAGGCGGTAATAAGCGTCCGGGCGCATTCGCAATGTACT 92997 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | || |||||||| || ||| | | || | ||| ||||||| ||| || || | Sbjct 92998 TGGAACCCTGGCATGCAGACATTTTCACCTTTTTAGACTTGCGAAAAAACTTTGGTAAAG 93057 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | || || | || || ||||| ||||||||||| || || ||||| ||| | | Sbjct 93058 ACGAAATCAGAGCTCGTGATCTGTTCTATGCTCTCTGGGTTCCTGATCTTTTCATGCAGC 93117 Query 94313 GCGTCGAGAAAAACT-CCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGA 94365 | ||| ||| | | | ||| ||| ||||| ||||||||| ||| ||| Sbjct 93118 GTGTC-AGAGACGGTGGTGATTGGTCTCTATTTTGCCCCAATGAAGCTCCTGGA 93170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719520496200