Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq57 136 4e-27 seq24 120 3e-22 seq10 116 4e-21 seq15 109 5e-19 seq118 107 2e-18 seq80 87.8 2e-12 >seq57 Length=110979 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || ||||| | | || |||||||| ||||| |||||||| Sbjct 11214 CCACCACGGAGACGAAGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTT 11273 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || |||||||||||||| | | |||| ||||| ||||| || ||||| Sbjct 11274 AGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGA 11333 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||||||||||||| |||| || | ||||| | ||||| || Sbjct 11334 ATACCTTCCTTGTCTTGAATTTTTTGTTTTACATTG-TCGATAGTGTCAGAAGACTCGAC 11392 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | ||| || ||||| || || || ||||| || |||||| Sbjct 11393 TTCTAAAGTAATCGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATG 11441 >seq24 Length=153386 Score = 120 bits (132), Expect = 3e-22 Identities = 128/169 (76%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | |||||| || | | || |||||||| ||||| ||||||||| Sbjct 151792 CCACCACGAAGACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGCTC 151851 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||| |||||||||||||||| | |||| ||||| |||||||| ||||| Sbjct 151852 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGA 151911 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGG 138556 |||||||| ||||| || ||||| || | | || | |||||||| Sbjct 151912 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGG 151960 >seq10 Length=205532 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | || |||||||| ||||||||||| ||| Sbjct 110446 CCACCACGAAGACGAAGGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTC 110387 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||| ||||||||||| | | |||| || | ||||||||| ||||| Sbjct 110386 AAAGTACGACCATCCTCAAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGG 110327 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| || ||||| || | | ||| | | || | || || || Sbjct 110326 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACT 110267 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||| || || || ||||| ||||| || || ||||| Sbjct 110266 TCTAAAGTAATCGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCAT 110220 >seq15 Length=177086 Score = 109 bits (120), Expect = 5e-19 Identities = 339/519 (65%), Gaps = 13/519 (3%) Strand=Plus/Minus Query 154023 ATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCC 154079 ||||| || ||||||||||| | ||| | || | || || |||||| ||||| Sbjct 93019 ATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCT 92960 Query 154080 TGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCG 154139 |||||||| | || || |||||||||| || || | |||||| | ||| | | | Sbjct 92959 TGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAG 92900 Query 154140 GTGCCGTTGGT--CG--AATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAAC 154195 |||||||| || ||| || | || | || || | | || | ||| | Sbjct 92899 TAACCGTTGGTGCCGGCAATGTATGAT----CCACTAGCACGAATGTTGTGAATGTTCAA 92844 Query 154196 GCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGC 154254 |||||| ||||| || || ||| || || ||| ||| |||||| ||||| | Sbjct 92843 GCCAATACCGCCTGCTGT-CTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATAC 92785 Query 154255 CGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCG 154314 | ||||| ||| || | | |||||||||||| ||| ||||||| ||| | | Sbjct 92784 CTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTG 92725 Query 154315 TTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGT 154374 | || || ||| | || ||||| ||||| ||||| | ||| ||||| | || Sbjct 92724 TGCCTGCATTAAATAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGT 92665 Query 154375 ACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434 | || || || || | || ||||| || || || |||| ||| || ||||||| || Sbjct 92664 ATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCA 92605 Query 154435 TGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGG 154494 || || |||||||| || | | ||||||||| | || || | ||||||| Sbjct 92604 AATGTTGAGGACGTTCAGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGG 92545 Query 154495 TTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCAT 154533 ||||| |||| || | ||||| | ||||| | |||| Sbjct 92544 TTTTGAAACCAAAGAAGTTGTACTTGAAATCACGGTCAT 92506 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 153000 AGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACT 153059 |||| ||||||||||| | || | ||||||||| | ||| || || || || Sbjct 131782 AGTTCAATGAGGTCATTCAGTAAATGCTGGTTGACTATTTGGAATTCACCACTTTGAACA 131841 Query 153060 CGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGA 153119 || | | ||| | |||||||||| |||| |||||| ||||||||||||| | ||||||| Sbjct 131842 CGACGCGTATAAATATTGCTAGTGTAAGGCTCAAAGCATTCGTTATTGCCCAATATTTGA 131901 Query 153120 GCCGTGGTTGCGGTCGGCAT 153139 ||| | || || ||||| Sbjct 131902 CTAGTGCTAGCAGTAGGCAT 131921 >seq118 Length=67844 Score = 107 bits (118), Expect = 2e-18 Identities = 126/168 (75%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | | || ||||||||||||||||| || ||| Sbjct 19122 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 19063 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||| |||||||||||||||| | || ||||| ||||| || ||||| Sbjct 19062 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 19003 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTC 138554 |||||||| || || ||| ||||| || | |||| || | |||||| Sbjct 19002 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTG-TCAATGGTGTC 18956 >seq80 Length=87281 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 52626 ATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAG 52685 || ||| | || ||||| |||| || || || |||| || | ||||||||| | Sbjct 44474 ATTGAACAAGAATTTTTGACGGATGCTCTTCCCGTCGCTCTCATCGGCATGAACTCTGCC 44415 Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA 52745 | ||||| |||||||||| || || || |||||||| |||| |||| | | | Sbjct 44414 TTGATGTGTCAGTACATCGAATTCGTTGCTGATCGTCTCATGGTT--GCTCTTGGATTCG 44357 Query 52746 A--AGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCA 52803 | || | || ||| |||||| ||||| |||||| ||| || || ||| | |||| Sbjct 44356 ACAAGATTTACATGGCTACCAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCA 44297 Query 52804 AGACCAACTTTTTCGAGAAGCGAGTC 52829 |||||||||| || || ||||| ||| Sbjct 44296 AGACCAACTTCTTTGAAAAGCGTGTC 44271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496258709048400