Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq80 86.0 6e-12 >seq80 Length=87281 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 47355 GAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGA 47414 ||||| ||| |||||| || ||||| | || ||||| |||| || | | || Sbjct 44486 GAAGCTGTCAGCATTGAACAAGAATTTTTGACGGATGCTCTTCCCGTCGCTCTCATCGGC 44427 Query 47415 ATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAG 47474 |||||| | | ||||| | ||||||||||||| || || || || || | ||| | Sbjct 44426 ATGAACTCTGCCTTGATGTGTCAGTACATCGAATTCGTTGCTGATCGTCTCATGGTT--G 44369 Query 47475 CTAAAGTATCC--CAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTT 47532 || | || | |||||||||| | |||||||| || |||||| ||| || | Sbjct 44368 CTCTTGGATTCGACAAGATTTACATGGCTACCAATCCATTTGACTTTATGGACATGATCT 44309 Query 47533 CGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATATAAACGT 47585 | || | |||||||||||||| || || ||||| ||| || ||| ||||| Sbjct 44308 CTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCTGATTATCAACGT 44256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497263462800