Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq57 140 3e-28 seq10 118 1e-21 seq15 111 1e-19 seq24 95.1 1e-14 >seq57 Length=110979 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || | ||| || || |||||||||||||| ||||| ||| Sbjct 11211 ATACCACCACGGAGACGAAGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCG 11270 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| | ||| || | |||||| || || | || | ||||| || || || Sbjct 11271 CTTAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGA 11330 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| || ||||||||||||||||| | || | ||||| ||||||||| Sbjct 11331 GGAATACCTTCCTTGTCTTGAATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCG 11390 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||||| ||| || || || || || || ||||| |||||||| Sbjct 11391 ACTTCTAAAGTAATCGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 11440 >seq10 Length=205532 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || |||||||||||||| || || || || | || | ||| || | |||| Sbjct 110422 TGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCAAGTTGT 110363 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || | || || ||||| || || || ||||| || |||||||| ||| Sbjct 110362 TTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTT 110303 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || |||| ||| | | || ||||| |||||||| | ||||| ||| |||||||| Sbjct 110302 TGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTGCCGGTA 110243 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| || |||||||| Sbjct 110242 AGAGTCTTTACGAAGATTTGCAT 110220 >seq15 Length=177086 Score = 111 bits (122), Expect = 1e-19 Identities = 906/1444 (63%), Gaps = 30/1444 (2%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 ||| | || |||||| ||||||| || ||||||| || || || || | || ||| | Sbjct 92580 AAGATTGCTGAACGTCCTCAACATTTGATCATGCGTGTTGCGATCGGTATCCATGGAACC 92639 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 || || || || | || || ||| | ||||||||| ||| || || || ||||| Sbjct 92640 GATATTGATGCAGCTATTGAGACATACAACTTGATGTCTGAAAGATACTTTACACACGCT 92699 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTG-CCTCAGTTGTCTTCGTGTTTTTTGCT 123076 ||||| ||||| || || ||||| | | | || || ||||||| ||||| ||||| Sbjct 92700 AGTCCTACTTTATTTAATGCAGGCAC-ACCTCGTCCCCAAATGTCTTCTTGTTTCTTGCT 92758 Query 123077 CACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGAT-TGCGCGTTGA 123135 |||| || ||||| ||| ||||||||||| || | | || || || | Sbjct 92759 CACCATGAAGGAAGATTCGATCGAAGGTATCTATGAGACGCT-CAAAATCTGTGCTCAAA 92817 Query 123136 TTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCC 123195 | ||||| | ||||| || ||| ||||| | ||| || | | | | ||| Sbjct 92818 TCTCCAAGACAGCAGGCGGTATTGGCTTGAACATTCACAACATTCGTGCTAGTGGATCAT 92877 Query 123196 GCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATA 123255 ||| ||||| |||| | || ||| | ||||||| || |||| ||| | Sbjct 92878 ACATTGCCGGCACCAACGGTTACTCCAACGGATTATTGCCCATGCTCCGTGTTTTCAACA 92937 Query 123256 ACGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTATC 123312 | | | || | ||||| || ||||| || || ||||| | || || || Sbjct 92938 ATACGGCTCGTTATGTCGATCAAGGCGGTAATAAGCGTCCGGGCGCATTCGCAATGTACT 92997 Query 123313 TAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTT---AAAACGCAACATGGGGG 123369 | ||||| ||||| | || | | | |||||| | || |||| ||| | || Sbjct 92998 TGGAACCCTGGCATGCAGACATTTTCACCTTTTTAGACTTGCGAAAA---AACTTTGGTA 93054 Query 123370 CGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGC 123429 || |||| | ||| || ||| |||| || ||| | ||||| || ||| | || |||| Sbjct 93055 AAGACGAAATCAGAGCTCGTGATCTGTTCTATGCTCTCTGGGTTCCTGATCTTTTCATGC 93114 Query 123430 GACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGA 123489 || || | ||||| || | ||||| || | || ||| || ||| || || Sbjct 93115 AGCGTGTCAGAGACGGTGGTGATTGGTCTCTATTTTGCCCCAATGAAGCTCCTGGATTAC 93174 Query 123490 GCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAAC 123549 || || | || | | |||| | | || | ||||||| || ||||| || Sbjct 93175 ATGAAGTCTGGGGTGACGAATTTGTTGCTCTCTATGAAAAATACGAACGTGAAGG--AAG 93232 Query 123550 AGGT-TAGTCAGGTTC-CGGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGA 123607 || | || | || ||| | | ||| | ||| | || ||||| || Sbjct 93233 AGCTAGAGAAACAATCAAGGCTCAAAAGCTGTGGTATGCCATTTTGGAGGCACAAACGGA 93292 Query 123608 AACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAA 123667 || || | || | ||| ||||| || || || || ||||| || | |||||| || Sbjct 93293 GACTGGTAATCCATTCATACTCTATAAGGATGCTTGTAACAGAAAGAGTAATCAGCAAAA 93352 Query 123668 CTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGA 123727 |||||| || || || || || || || || | |||||| | |||||| | | || Sbjct 93353 CTTGGGTACGATCAAGTGCAGCAACCTGTGTACAGAAATTGTTGAATACTCAAGTCCTGA 93412 Query 123728 TCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGA---ATCGTTGCG-TCGAAAACG 123783 | |||| || || ||||| ||||| || | |||| | | | || | || | | | Sbjct 93413 TGAAGTCGCTGTCTGTAACTTGGCCTCCA-TTGCTCTACCTACCTATGTGATCAATAGAG 93471 Query 123784 GCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGT-AGTAAAGAATTTGAAC 123842 | | ||||||||| || | | || || | | | || | || |||||| Sbjct 93472 AAAAGTATGATTTCCAAAAACTGCACGATGTTACCAAGGTTATCACTAGA-AACTTGAAC 93530 Query 123843 AAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTG-TCTAATTTGAAACA 123901 || || || ||| | |||| |||||| | ||||| || | || || || ||| Sbjct 93531 AAGATCATTGATATCAATTACTATCCTGTCATCGAAGC-CGAAAGATCCAACAAGAGACA 93589 Query 123902 CAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCC 123961 |||||| | || | || ||||||| || |||||| | || | || || || Sbjct 93590 TAGACCGATTGGTTTAGGTGTTCAAGGTTTAGCCGACACTTTCATGGCCCTTCGTTATCC 93649 Query 123962 GTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGG 124021 | ||| ||||| ||| | | || | ||||| ||||| || || | | Sbjct 93650 ATTCGATTCACCAGAAGCCAAGCAGTTGAACATTCAAATCTTTGAAACCATCTACCATGC 93709 Query 124022 CGCTTTGGAGGCGAGCTGCGAACTTGC-GAAAATTCACGGCGCGTACGAAAGTTACGCGG 124080 || ||||| || ||||| | || ||||| | | || | ||||||| || | | Sbjct 93710 TGCCTTGGAAGCCTCTTGCGAGTTGGCTGAAAAGT-ATGGACCCTACGAAACCTATGAAG 93768 Query 124081 GCAGCCCGGCGAGCCGA-GGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAAT 124139 ||||||| | | || | ||||| |||| |||||||||||||||| ||||| || ||| Sbjct 93769 GCAGCCCTG-TATCCAAGGGTATCCTGCAATACGACATGTGGAATGTCACACCTACCAAT 93827 Query 124140 TTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTG 124199 | ||||||||| || | || || || | | ||| ||| | |||||||| ||| Sbjct 93828 CTTTGGGACTGGGCCGCACTCAAGGAAAAGATTGCCAAGCATGGTGTCCGTAACTCTCTG 93887 Query 124200 TTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTC 124259 |||| || ||||| || || ||||| ||||||| | || ||| |||| || Sbjct 93888 CTGGTTGCTCCTATGCCTACTGCCTCCACTTCTCAAATGCTCGGTTTCAATGAATGTTTT 93947 Query 124260 GAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATA 124319 || || | ||| ||| || ||| || || ||| | | || || | |||| || | Sbjct 93948 GAACCTTACACATCCAACTTTTACACCCGTCGTGTGCTCTCAGGTGAATATCAAATGGTC 94007 Query 124320 AATC 124323 |||| Sbjct 94008 AATC 94011 >seq24 Length=153386 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 |||| || || || |||||||||||||| ||||| ||||| | ||| | || || Sbjct 151810 ACTAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGCTCAAGGTACGACCGTCTTCG 151869 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | |||||| || || | || | ||||| ||||| || ||||| ||||| || |||||| Sbjct 151870 AGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGA 151929 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAA 45284 || ||||| |||| || | || | |||||||||| Sbjct 151930 ATCTTTTGCTTGA-CGTTGTCAATGGTGTCGGAA 151962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451999838226200