Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq15 176 6e-39 seq297 111 2e-19 seq80 93.3 5e-14 >seq15 Length=177086 Score = 176 bits (194), Expect = 6e-39 Identities = 825/1291 (64%), Gaps = 38/1291 (3%) Strand=Plus/Minus Query 115908 GTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGT 115967 ||||| ||||| || ||||| || |||||| ||| | ||||| | |||||||| || Sbjct 93965 GTTGGATGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGT 93906 Query 115968 GGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAG 116027 ||||| || || | || || ||| |||| ||| | ||| ||||||||| Sbjct 93905 AGGCATAGGAGCAACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAG 93846 Query 116028 GGCGTCCCAGTCGTAG---TTG--AGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082 ||| ||||||| | ||| || | || | | |||||| || | || ||| Sbjct 93845 TGCGGCCCAGTCCCAAAGATTGGTAGGTGTGACA-----TTCCACATGTCGTATTGCAGG 93791 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 ||||| | ||| | || || ||| | || || || || || | || ||||| Sbjct 93790 ATACCCTTGGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAAC 93731 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 116202 ||| | || || | ||| || || || || || ||||| || || |||| | Sbjct 93730 TCGCAAGAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGC 93671 Query 116203 TTGGCCTCGTCGGAATCAAACGCGA----GACGGCACAAAATAAATACATCCGCGAGACC 116258 ||||| || ||||| || | || || || || | || | || || | ||| Sbjct 93670 TTGGCTTCTGGTGAATCGAATG-GATAACGAAGGGCCATGA-AAGTG--TCGGCTAAACC 93615 Query 116259 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCCACGG 116317 ||| ||||| | ||||| || | ||||||| | || || |||||| || || | Sbjct 93614 TTGAACACCTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCG-GCTTCGATGACAG 93556 Query 116318 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 116377 |||| |||| |||| || | | | || | ||| | |||| |||||| || | || | Sbjct 93555 GATAGTAATTGATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGT 93496 Query 116378 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGA---CATACTTAGGAAGGGCGA 116434 | || |||| | ||||| | | ||||| ||||| |||| |||| || || | Sbjct 93495 GCAGTTTTTGGAAATCATACTTT----TCTCT--ATTGATCACATAGGTAGGTAGAGCAA 93442 Query 116435 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 116494 | || |||| ||||| |||| | ||||| | | ||| || | |||||| |||| Sbjct 93441 TGGAGGCCAAGTTACAGACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTAC 93382 Query 116495 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 116554 ||| || | ||| || || |||||||| | ||||| |||| ||||||| |||| Sbjct 93381 ACAGGTTGCTGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCAT 93322 Query 116555 CCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA 116614 |||| ||||| || |||| | || ||||||||||| | || | ||| || | ||| | Sbjct 93321 CCTTATAGAGTATGAATGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACA 93262 Query 116615 -CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGG 116673 | | | | || | | || | | |||| || || ||||| ||| ||||| Sbjct 93261 GCTTTTGAGCCTTG-ATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGA 93203 Query 116674 GCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAG 116732 || |||| || |||||| ||| | || | || || || | || || || || || Sbjct 93202 GCAACAAATTCGTCACCC-CAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAG 93144 Query 116733 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792 |||||| | |||||| || || |||| |||||| || || || | |||||| || | Sbjct 93143 AGACCAATCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATA 93084 Query 116793 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 116852 ||| ||||| ||| | ||| || | || || ||||| || |||||| Sbjct 93083 GAACAGATCACGAGCTCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGT 93024 Query 116853 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACC 116909 | || || || ||||| ||||||| ||||| |||| || ||| || | ||| Sbjct 93023 GAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACC 92964 Query 116910 AGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG-AATGATACCAT 116968 | || | ||||| | ||||| ||| || || || ||||| || ||| || || | Sbjct 92963 GCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGT 92905 Query 116969 CAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCA 117028 || | || || || || ||| || | || | | | ||| |||| || Sbjct 92904 TGGAGTAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCA 92845 Query 117029 TACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCC 117088 |||||||| ||||| ||| |||||||| || || |||| | | ||||| | Sbjct 92844 AGCCAATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATAC 92785 Query 117089 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTG 117148 | |||||||| || |||| | | || | ||| || |||||||| || | |||| Sbjct 92784 CTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTG 92725 Query 117149 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179 | || || || || | || || | ||||| Sbjct 92724 TGCCTGCATTAAATAAAGTAGGACTAGCGTG 92694 >seq297 Length=22619 Score = 111 bits (122), Expect = 2e-19 Identities = 207/304 (68%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 176619 AGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCA 176678 ||| ||| | |||| ||| |||||||| || ||||||||||| | ||| ||| |||| Sbjct 8981 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 9040 Query 176679 TAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACCTTGTTGAA 176738 | ||||| | |||||||| || | ||| |||| || ||| | ||||| || |||| Sbjct 9041 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 9100 Query 176739 GACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAG 176798 |||| | ||| ||||| || || | |||| || |||||| || ||| Sbjct 9101 GACCAAGAATAGCCTTGATATTTTTTATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 9160 Query 176799 CGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAA 176858 | || ||||| || || || || | ||||| ||||| |||| |||||||||| Sbjct 9161 CATCACGGACGTTCAGCAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 9220 Query 176859 CCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCG 176918 | || || | |||| | | || | ||| || |||||||| || || | ||| || | Sbjct 9221 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTAATGATCAGAG 9280 Query 176919 TACA 176922 |||| Sbjct 9281 TACA 9284 >seq80 Length=87281 Score = 93.3 bits (102), Expect = 5e-14 Identities = 187/275 (68%), Gaps = 7/275 (3%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || || ||||| || ||||| |||| | |||||| ||| || ||| Sbjct 44550 AGCAAAGTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACC 44609 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||| ||||| || || || | ||| || || | | ||| || |||||||||||||| Sbjct 44610 GGGCATCAGACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGAT 44669 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAA 127698 || || ||| || || |||| ||||| || ||||| || | | || | || Sbjct 44670 ACCTTCGACAGCAGCAAAGGCAACAAGACGTTCAGCAAAAGAACCG---TTAGAGGAAAT 44726 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758 ||| || | ||||| | |||||| ||| |||||| |||| || | || || ||| Sbjct 44727 CCATTTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAA 44786 Query 127759 GAGTTCCTTCTTTTCTGATGG--ATCTTTGATGTA 127791 ||| | || ||||| ||| |||||||| || Sbjct 44787 GAG--CATTTCTTTCTCTTGGTTGTCTTTGATATA 44819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613502637040200