Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq15 255 7e-63 seq80 134 2e-26 seq297 113 6e-20 >seq15 Length=177086 Score = 255 bits (282), Expect = 7e-63 Identities = 1106/1726 (64%), Gaps = 30/1726 (2%) Strand=Plus/Plus Query 111622 TGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACAT 111681 || ||||||| || ||||||||||||||||| ||||||||| | | | | ||||||| Sbjct 92605 TGATCATGCGTGTTGCGATCGGTATCCATGGAACCGATATTGATGCAGCTATTGAGACAT 92664 Query 111682 ACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTA 111741 || || |||||| | || | ||||| | || || | || || || || | Sbjct 92665 ACAACTTGATGTCTGAAAGATACTTTACACACGCTAGTCCTACTTTATTTAATGCAGGCA 92724 Query 111742 CACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATG 111801 |||| | ||||||||||| ||||||| | | | | ||||| ||||| ||| | | Sbjct 92725 CACCTCGTCCCCAAATGTCTTCTTGTTTCTTGCTCACCATGAAGGAAGATTCGATCGAAG 92784 Query 111802 GCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGA 111861 | || || | || |||| ||||| |||||||| ||| || || ||||| || Sbjct 92785 GTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCCAAGACAGCAGGCGGTATTGGCT 92844 Query 111862 TGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAG 111921 || |||| || | | | || | || ||| || || || ||| | || Sbjct 92845 TGAACATTCACAACATTCGTGCTAGTGGATCATACATTGCCGGCACCAACGGTTACTCCA 92904 Query 111922 ATGGTATTATT-CCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCT 111980 | || |||||| || ||||| || || || ||| || || || ||||| | |||| Sbjct 92905 ACGG-ATTATTGCCCATGCTCCGTGTTTTCAACAATACGGCTCGTTATGTCGATCAAGGC 92963 Query 111981 GG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATC 112034 || ||||| ||| | ||||| | || | || || ||||| || || || Sbjct 92964 GGTAATAAGCGTCC---GGGCGCATTCGCAATGTACTTGGAACCCTGGCATGCAGACATT 93020 Query 112035 ATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCT 112093 | || | || ||||| ||| ||| | || || | | || || ||||| Sbjct 93021 TTCACCTTTTTAGACTTGCGAAAAAACTTTGGTAAAGACGAAAT-CAGAGCTCGTGATCT 93079 Query 112094 CTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTG 112153 |||| ||||||||| |||| ||||| |||||| || | || || |||| |||| Sbjct 93080 GTTCTATGCTCTCTGGGTTCCTGATCTTTTCATGCAGCGTGTCAGAGACGGTGGTGATTG 93139 Query 112154 GTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGA 112213 |||||| ||||| || | | || || || | || | | |||||| || |||| Sbjct 93140 GTCTCTATTTTGCCCCAATGAAGCTCCTGGATTACATGAAGTCTGGGGTGACGAATTTGT 93199 Query 112214 AGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGA 112273 || ||||| ||| ||||| ||| | | || | | || | ||| | Sbjct 93200 TGCTCTCTATGAAAAATACGAACGTGAAGGAAGAGCTAGAGAAACAATCAAGGCTCAAAA 93259 Query 112274 TGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAA 112333 ||||| | || ||| | || | ||||| |||||||||| |||| || || || || Sbjct 93260 GCTGTGGTATGCCATTTTGGAGGCACAAACGGAGACTGGTAATCCATTCATACTCTATAA 93319 Query 112334 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCT 112393 || || |||||| |||||||||||| | || |||||| ||||||| | |||||| Sbjct 93320 GGATGCTTGTAACAGAAAGAGTAATCAGCAAAACTTGGGTACGATCAAGTGCAGCAACCT 93379 Query 112394 CTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATC 112453 ||||||||||| | |||| || ||||| ||||| |||||| | || || Sbjct 93380 GTGTACAGAAATTGTTGAATACTCAAGTCCTGATGAAGTCGCTGTCTGTAACTTGGCCTC 93439 Query 112454 AATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCA 112513 || ||||| || | |||||| ||| | ||| ||| || |||| ||||||| || Sbjct 93440 CATTGCTCTACCTACCTATGTG-ATCAATAGAGAAAAGTAT--GATTTCCAAAAACTGCA 93496 Query 112514 CGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCC 112573 ||| ||||| || | |||| | |||| | |||| | ||||||| |||| || || Sbjct 93497 CGATGTTACCAAGGTTATCACTAGAAACTTGAACAAGATCATTGATATCAATTACTATCC 93556 Query 112574 CGTTGAGACTGCTCGTAA-ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAG 112632 || || || || ||| || | |||||| | || |||||| | ||||| |||| Sbjct 93557 TGTCATCGAAGC-CGAAAGATCCAACAAGAGACATAGACCGATTGGTTTAGGTGTTCAAG 93615 Query 112633 GTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 112692 || | || || ||||| ||| | |||| ||||| ||||| ||| | Sbjct 93616 GTTTAGCCGACACTTTCATGGCCCTTCGTTATCCATTCGATTCACCAGAAGCCAAGCAGT 93675 Query 112693 TCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGG 112752 | || | || ||||| || || || || || || | || || || ||||||| Sbjct 93676 TGAACATTCAAATCTTTGAAACCATCTACCATGCTGCCTTGGAAGCCTCTTGCGAGTTGG 93735 Query 112753 CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGG-TGCTT 112811 | || |||| || || ||||||| ||| || || | || |||||| | || Sbjct 93736 CTGAAAAGTATGGACCCTACGAAACCTATGAAGGCAGCCCTGTATC-CAAGGGTATCCTG 93794 Query 112812 CAATTTGATATGTGGGAAGGTGAGACCAAGCT-TCACTACGACTGGGACGCTCTCAAGGA 112870 |||| || |||||| || || | ||| | | || | ||||||| ||| |||||||| Sbjct 93795 CAATACGACATGTGG-AATGTCACACCTACCAATCTTTGGGACTGGGCCGCACTCAAGGA 93853 Query 112871 ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTC 112930 | || || | ||| | |||||| ||| || | || || ||||| || ||||| Sbjct 93854 AAAGATTGCCAAGCATGGTGTCCGTAACTCTCTGCTGGTTGCTCCTATGCCTACTGCCTC 93913 Query 112931 CACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCT 112990 ||| | ||||| | ||| |||||||| |||||||| ||||| | ||| | || Sbjct 93914 CACTTCTCAAATGCTCGGTTTCAATGAATGTTTTGAACCTTACACATCCAACTTTTACAC 93973 Query 112991 GAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA-CAAGCATCTCGTGGATGACCTCA 113049 | | ||| | || || | | || ||||| | | | | | ||| || Sbjct 93974 CCGTCGTGTGCTCTCAGGTGAATATCAAATGGTCAATCCTTGGTTACTTCG-TGATCTAG 94032 Query 113050 AAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCA 113109 || || ||||||||| | ||| ||||| || | || || | || || || | Sbjct 94033 TTGATATGGGTCTCTGGAATGACGATGTGAAGAATATGATCATGGCTGACGGAGGATCTA 94092 Query 113110 TTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA 113169 |||| || | || || | | | || | | ||| || || ||||||| Sbjct 94093 TTCAGAACGTGCCCAGCATCCCTCAAAACTTGAAAGACCTCTACAAGACCGTCTGGGAAA 94152 Query 113170 TCAAGATGAAGGA--TGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAG 113227 || | || | | ||||||||||||| || ||||||||| | ||||| ||||| Sbjct 94153 TCTC--TCAACGTACTATCATTGACATGGCTGCTGATCGTGGTGCGTATATTGACCAAAG 94210 Query 113228 TCAAAGTATGAATCTATTCATGG-AAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACA 113286 ||||||| |||| | || |||| | ||||| || |||||| | ||||||| Sbjct 94211 TCAAAGTTTGAACATCTTTATGGCTGAACCCAACTTTG-GTAAGCTCACCAGTATGCACT 94269 Query 113287 TGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 113332 | || ||||| | ||||| | || || || ||||||||||| || Sbjct 94270 TTTATGGTTGGCAAAAGGGATTAAAGACAGGCATGTATTACCTTCG 94315 Score = 109 bits (120), Expect = 7e-19 Identities = 285/426 (67%), Gaps = 9/426 (2%) Strand=Plus/Minus Query 111711 CACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTC 111770 || || ||||| || | ||||||||||||||||| | ||| ||| |||| ||||| ||| Sbjct 133340 CATGCTACACCTACATTGTTCAACGCTGGTACACCTAAACCTCAATTGTCTAGTTGCTTC 133281 Query 111771 CTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCC 111830 ||| || || || ||||| ||| | ||||| |||| ||| |||| ||||| Sbjct 133280 CTTGTTCAAATGAAAGAGGACAGTATCGAAGGCATCTACGATACTATCACCACGTGTGCT 133221 Query 111831 CAAATCTCAAAGTGGGCTGGTGGTATCGG-GATGCACATC-CATGATGTCAGAGCCAACA 111888 | |||||||||| ||||| ||| | || | ||| || | ||| || | | | Sbjct 133220 CGTATCTCAAAGTCTGCTGGCGGTGTTGGCGTTGCTGCTCAAAAGAT-TC-GTGGCTCTG 133163 Query 111889 AGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTAT 111948 ||| ||| ||| ||||| ||| || |||| || ||||||||||| | || | Sbjct 133162 GCTCTTATATCGCAGGAACAAACGGTACCTCCAATGGCATCATTCCAATGCTCAGAGTCT 133103 Query 111949 TTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGT---CGCAA-GGGATCTATCGCA 112004 |||| | ||| || |||| ||| | |||| || || ||||| || | || | || Sbjct 133102 TTAATGACACTGCTCGCTTTGTGACACAAGGAGGTGGTAAACGCAACGGTAACT-TTGCT 133044 Query 112005 GTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAA 112064 ||||| | || || ||||| | || | | || ||| | || ||||| ||| | Sbjct 133043 GTCTACATAGAACCTTGGCATGTCGACGTATTCGAATTCTTGGACTTGCGCAAGAACAAT 132984 Query 112065 GGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTC 112124 |||| |||||| ||| ||||| | |||| | | ||| | || ||||| ||| Sbjct 132983 GGTGCTGAGGAAATGCGCGCACGCGACTTGTTCTTGGGATTATGGGTGCCTGATCTTTTC 132924 Query 112125 ATGAAG 112130 |||||| Sbjct 132923 ATGAAG 132918 Score = 93.3 bits (102), Expect = 5e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA 112493 ||||| ||||| | || || | || | ||||||| ||| || ||| ||||||||| Sbjct 132459 GCTGTCTGTAATTTAGCTTCTCTTGCGTTACCCAAGTTTGTCAATAGAGAAACAAAGACA 132400 Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553 ||||||| ||||| || |||||||| || ||| || ||| || || |||| ||| Sbjct 132399 TTTGATTTCGAAAAGCTTCACGAAGTCACCAAAGTAGTGACACGCAATCTGAACAAGGTT 132340 Query 112554 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 |||||| |||| ||| || ||||| || ||||| || ||| |||||||||| Sbjct 132339 ATTGATGTCAATTATTATCCAGTTGAAGAAGCCCGTAACAGCAACATGCGACACCGTCC 132281 >seq80 Length=87281 Score = 134 bits (148), Expect = 2e-26 Identities = 289/419 (69%), Gaps = 11/419 (3%) Strand=Plus/Minus Query 101905 TGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAACTTTGCTG 101964 |||| ||||||||||| || ||||| |||||| ||| || | | | |||||| || Sbjct 44974 TGGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTTTTGTG 44915 Query 101965 ATGAGGTGCA-ATCCTCTGAAGCGAGATCTTTCTATGCGTATCAATGTCATAAT-GAAAT 102022 |||| || | || | ||||||| | || |||||||| | |||| |||| || |||| Sbjct 44914 ATGAAGTCAAGATTC-CTGAAGCTAAATGTTTCTATGGCTTTCAAA-TCATGATTGAAAA 44857 Query 102023 GGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAA 102082 | || | || || |||||| | || |||| ||||| || || ||||| Sbjct 44856 TATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGACAACCAAGAGAA 44797 Query 102083 GAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAG-CGGATTGGG 102141 | ||||||| || || | || | || ||||| ||| |||||| | ||||||| Sbjct 44796 AGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTAT-CAAGAGAAAGGCTGATTGGG 44738 Query 102142 CTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 102201 | | || ||| || | || || |||| |||||||| || || | || ||||| Sbjct 44737 CCTTCAAATGGATTTCCTCTAA--CG-GTTCTTTTGCTGAACGTCTTGTTGCCTTTGCTG 44681 Query 102202 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGA 102260 ||| || ||||||||||||||||||||||| ||| | || | ||||||||| || || Sbjct 44680 CTGTCGAAGGTATCTTCTTCTCTGGTTCCTT-TGCTTCCATCTTTTGGCTCAAAAAACGT 44622 Query 102261 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 102319 ||||| ||||| ||| | ||| ||| || | |||| |||||| || || || || Sbjct 44621 GGTCTGATGCCCGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTTCA 44563 >seq297 Length=22619 Score = 113 bits (124), Expect = 6e-20 Identities = 203/294 (69%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782 |||| || ||||||||||| || ||||| || | ||| ||| ||||||||||| | | Sbjct 8992 TTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCATGATCATCAAA 9051 Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842 |||||||| || | ||| |||| || ||| | ||||| || |||||||| | || Sbjct 9052 CGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGACCAAGAATA 9111 Query 176843 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACA 176902 ||||| || || | |||| || |||| | | ||| ||||||| || Sbjct 9112 GCCTTGATATTTTTTATTTCTTCATTCTTCATGAGTTCAGCATTAGAAACATCACGGACG 9171 Query 176903 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGA 176962 ||| || ||||||| ||||| ||||| |||| || |||||||| || || | | Sbjct 9172 TTCAGCAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAACTACTGACATA 9231 Query 176963 CC-CGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACA 177015 || | ||| | |||| || || |||||||| ||||| | ||| || ||||| Sbjct 9232 CCACTCAA-GACAAGCGACTTGGCTGAATCACCTTCTGTAATGATCAGAGTACA 9284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620737783228400