Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq15 179 4e-40 seq80 96.9 4e-15 seq367 95.1 1e-14 >seq15 Length=177086 Score = 179 bits (198), Expect = 4e-40 Identities = 1076/1709 (63%), Gaps = 40/1709 (2%) Strand=Plus/Minus Query 109530 ACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTA 109589 |||||||||||| |||||||| |||||| ||| ||||||||||| |||||||| Sbjct 94193 ACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGTCTTGTA 94134 Query 109590 CAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACC---AGCCTT 109646 | | || | | | || ||| | ||| |||||||| || || |||| | Sbjct 94133 GAGGTCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTCAGCCAT 94074 Query 109647 CACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATC-----GTCA 109701 | ||| || ||||| || | ||||||||| | | ||||| || | Sbjct 94073 GATCAT---ATTCTTCACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAGTAA 94017 Query 109702 ACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTA 109761 |||| ||||||| | ||||||| | || || ||| ||| | ||| Sbjct 94016 CCAAGGA-----TTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTG 93962 Query 109762 GTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGC 109821 | ||||| ||||| ||||| |||||| || || ||||| | |||||| || || ||| Sbjct 93961 GATGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGC 93902 Query 109822 ATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCG 109881 || ||||| | || ||| ||| |||| ||| | | | | | || | |||| Sbjct 93901 ATAGGAGCAACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGTGCG 93842 Query 109882 TCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACA 109941 |||| || || || || || | || || |||||| || ||| || | | Sbjct 93841 GCCCAGTCCCAAAGATTGGTAG-----GTGTGAC-ATTCCACATGTCGTATTGCAGGATA 93788 Query 109942 CCCTCAGCAGCAGGAGAACCCTTGAAAC-TCTCGTACGACCCCTCAACCTCGGCCAACTC 110000 |||| | |||| | |||| | | | ||||| | || | || |||||||| Sbjct 93787 CCCTTGGATACAGG-GCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTC 93729 Query 110001 GGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCG 110060 | | || || || | || ||||| || || || ||||| || ||| |||| | Sbjct 93728 GCAAGAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTT 93669 Query 110061 AGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAAC 110120 | ||| | ||||| ||| || | || || || |||| ||| ||||| Sbjct 93668 GGCTTCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAAC 93609 Query 110121 ACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACG---GGGTA 110177 ||| | |||||| || | ||| || |||| || | | || ||| | | || || Sbjct 93608 ACCTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGC---TTCGATGACAGGATA 93552 Query 110178 AAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAG 110237 | ||| || |||| | || | || | || | | ||| || | || || || Sbjct 93551 GTAATTGATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAG 93492 Query 110238 TTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGC 110297 ||| | | |||| || ||||| ||| | || ||||| | || |||||||| || || Sbjct 93491 TTTTTGGAAATCATAC-TTTTC-TCTATTGATC-ACATAGGTAGGTAGAGCAATGGAGGC 93435 Query 110298 AAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTT 110357 | || || |||| || || | |||||| | |||||| ||||||| ||| Sbjct 93434 CAAGTTACAGACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTT 93375 Query 110358 GGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATA 110417 | | ||| || ||||||||| | |||||| || ||| || ||||||||||| Sbjct 93374 GCTGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATA 93315 Query 110418 GAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGC 110477 ||| ||| |||| ||||||| ||||| |||| || | |||||| | ||| | | Sbjct 93314 GAGTATGAATGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTG 93255 Query 110478 GGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAA 110537 || || ||| | |||| ||||| ||||| || || | | |||| Sbjct 93254 AGCCTTGATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAA 93195 Query 110538 TTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATT 110597 ||| | || | || ||| | || || | | ||| || || || ||||||| Sbjct 93194 TTCGTCACCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATC 93135 Query 110598 TCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTC 110657 ||||| || || | || |||||| || ||||||| ||| | || |||| || || Sbjct 93134 ACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACAGATC 93075 Query 110658 ACG-GCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATAT 110716 ||| || || || || | ||| ||| || | || |||||| | || | Sbjct 93074 ACGAGCTCTGATT-TCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGT 93016 Query 110717 CCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGAC--CCGCCTGGTT 110774 | | ||||| ||||| | || | |||| | ||| ||| | |||||| | | Sbjct 93015 CTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGAT 92956 Query 110775 A-ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGG-AATAATTCCATCGGATTGA 110832 ||||| || || || ||||| || | |||||| || |||||| || | ||| | | Sbjct 92955 CGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGGAGTAA 92897 Query 110833 CCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATA 110892 || || || || ||| || | | |||||||||| ||| || | || |||||| Sbjct 92896 CCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATA 92837 Query 110893 CCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATC 110952 || || || ||| ||||| ||||| | |||| || |||| ||||| || ||| Sbjct 92836 CCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATC 92777 Query 110953 GAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCA 111012 |||||| |||| ||| | | || ||||||||||| || |||||||| || || ||| Sbjct 92776 GAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCA 92717 Query 111013 TTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCG 111072 || || | ||||| | || || | || | || |||||| ||||||||| || Sbjct 92716 TTAAATAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCA 92657 Query 111073 AGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGA 111132 | || | | ||| | || || ||||| || ||||| ||||||| || || |||| Sbjct 92656 ATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGA 92597 Query 111133 GGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGA 111192 || ||| | ||| || |||| |||||||| ||| ||||| |||| | Sbjct 92596 GGACGTTCAGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGGTTTTGAAA 92537 Query 111193 CCAAAGTATCCAAAATCGAAATCACGATC 111221 |||||| | | | ||||||||| || Sbjct 92536 CCAAAGAAGTTGTACTTGAAATCACGGTC 92508 >seq80 Length=87281 Score = 96.9 bits (106), Expect = 4e-15 Identities = 290/434 (67%), Gaps = 18/434 (4%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGTC 119553 ||||| || |||||| |||||||| ||| |||| | ||||| ||||| |||| | Sbjct 44551 GCAAAGTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAA--C 44608 Query 119554 CAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGA 119613 | ||||| || || | ||| || ||||||||||||| | ||| ||||| ||||||| Sbjct 44609 CGGGCATCAGACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGA 44668 Query 119614 TGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAA-- 119671 | || || ||| || || || | ||||| |||||||||| | | | ||| Sbjct 44669 TACCTTCGACAGCAGCAAAGGCAACAAGACGTTCAGCAAAAGAAC--CGTTAGAGGAAAT 44726 Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA 119731 ||| |||| ||||| | ||||| | || || || |||| ||| | || || ||| Sbjct 44727 CCATTTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGC--AGAA 44784 Query 119732 AAGTTGC--TTCTTT-TCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788 ||| || |||||| || || || ||||| | ||||| | | ||| || Sbjct 44785 AAG-AGCATTTCTTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGT 44843 Query 119789 CTCACCATGAACCATTTCATTGTGTGA-CTGATAGGCATAAAATGAGCGAGCTTCGGAAA 119847 || | |||| ||||| | ||| ||| || |||| || | |||||| | || Sbjct 44844 TTCTGCGTGAATATTTTCAAT-CATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAA 44902 Query 119848 TTTGCACTTCGTCAGCAAAATTGTTG-TTGATATTTTCAAAAACAATTCCATCGGATCCA 119906 | | ||||| ||| ||||| | ||| | |||||| |||||| ||||| || ||| Sbjct 44903 TCTTGACTTCATCA-CAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCA 44961 Query 119907 GCGAAGAATGCTAA 119920 || ||||| || || Sbjct 44962 GCAAAGAAGGCCAA 44975 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 36007 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 35948 Query 136777 GGGAACA 136783 | || || Sbjct 35947 GTGACCA 35941 >seq367 Length=12313 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/198 (73%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 109420 ATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTG--GAAA 109477 ||||| || || | ||| ||||||||| || | |||||||| |||||| || | || Sbjct 3300 ATACCTGTCTTCAAACCCTTCTTCCATGCATAAAAGTGCATTGATGAGAGTCTGCTGTAA 3241 Query 109478 GTGTCGGACTCTCCATAAACAAG-TTCATCGACTGAGACTGATCGATGAATCGACCACGA 109536 || ||| || || ||| || || | |||||||| || |||||||| || ||| | Sbjct 3240 CTG--GGA-TCAGCAGAAAACAGATTGAGAGACTGAGATTGGTCGATGAAAGGAGCACAA 3184 Query 109537 TCAGCCGCCATGTCGATGAT-ACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATT 109595 || |||||||||||||||| |||| ||| |||||||| | |||||||| || || Sbjct 3183 TCGACCGCCATGTCGATGATGACAC-GTTGAGAGATTTCCCAAGCTGTCTTGTATAACTT 3125 Query 109596 CTTGATATCATCGGGAAT 109613 ||| | || || ||||| Sbjct 3124 CTTCAAGTCTTCAGGAAT 3107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588971619491000