Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq15 264 1e-65 seq297 107 2e-18 >seq15 Length=177086 Score = 264 bits (292), Expect = 1e-65 Identities = 893/1369 (65%), Gaps = 40/1369 (3%) Strand=Plus/Minus Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 ||||| |||||||| |||||||| ||| | ||||| | |||||||| || ||||| Sbjct 93958 GTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATA 93899 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG---ATGCGTTCCTTGAGAACA 106063 || || | || ||| |||||| | ||| | |||| || ||||||||| | Sbjct 93898 GGAGCAACCAGCAGAGAGTTACGGACACCATG---CTTGGCAATCTTTTCCTTGAGTGCG 93842 Query 106064 TCCCAGTCGTAGTTGA--GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCAC-CCCT 106120 ||||||| | || | | ||| | || |||| |||| || |||| || | |||| Sbjct 93841 GCCCAGTCCCAAA-GATTGGTAGGTGTGACATTCC-ACATGTCGTATTGCAGGATACCCT 93784 Query 106121 TGGG-ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACA 106179 ||| || || | || ||| | || || |||| || | ||||||||| || || Sbjct 93783 TGGATACAGGGCTG--CCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCA 93726 Query 106180 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 106239 || |||| || || || || |||||||||||||| || |||| || |||||| Sbjct 93725 AGAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGC 93666 Query 106240 TTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 106299 ||| |||||| |||| || || || || || || | |||||||||||| Sbjct 93665 TTCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACC 93606 Query 106300 CAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAAT 106358 |||||||| ||||| |||| | | || || |||||| || || ||||| ||| Sbjct 93605 TAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCG-GCTTCGATGACAGGATAGTAAT 93547 Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418 | | ||||||| ||| | ||| | || | || ||| || | || || ||||||| Sbjct 93546 TGATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTT 93487 Query 106419 CATAATCAAAAGTGCGAGTCTCTTCATTGA---CATACTTTGGAAGGGCGATTGATGCCA 106475 ||||| | | ||||| ||||| |||| | || || || || || |||| Sbjct 93486 GGAAATCATACTTT----TCTCT--ATTGATCACATAGGTAGGTAGAGCAATGGAGGCCA 93433 Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535 | || || ||||| ||||| | || ||| || | |||||||||||||| |||| Sbjct 93432 AGTTACAGACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTGC 93373 Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGA 106595 | ||| ||||| ||||| || | || ||||||||| |||| || |||||||| |||| Sbjct 93372 TGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGA 93313 Query 106596 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCG 106654 | ||| | || | || |||||||| |||| || | ||| || | ||||| | | | | Sbjct 93312 GTATGAATGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGAG 93253 Query 106655 GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 || | | | | | || | ||| || ||||| ||| ||||| || |||| Sbjct 93252 CCTTG-ATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAAT 93194 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 106774 || |||||| | || | || || || | | || || || |||||||| | | Sbjct 93193 TCGTCACCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATCA 93134 Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834 ||||| || || |||| ||||||||| || |||| ||| || | | || ||||| Sbjct 93133 CCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACAGATCA 93074 Query 106835 CTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 | | | | || || || | ||| ||| ||| || || | || | || || Sbjct 93073 CGAGCTCTGA-TTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTC 93015 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTG 106947 || ||||| || || | || | ||||| | ||| ||||| || |||| Sbjct 93014 TGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCC---GGACGCTTATTACCGCCTTG 92958 Query 106948 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG-AATAATACCATCTGATT 107006 || ||||| || || || ||| || || || ||||| || |||||| || | || | Sbjct 92957 ATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGGAGT 92899 Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 107066 ||| || || || ||| ||| | | || | | | || |||| || |||| Sbjct 92898 AACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAA 92839 Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126 |||| || || ||| |||||||| ||||| | || || |||||||||| | || Sbjct 92838 TACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGA 92779 Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 107186 | || || ||||| ||| || | ||| ||| ||||| || || | ||||| || | Sbjct 92778 TCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTG 92719 Query 107187 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCT 107246 |||| || | || || | ||||| | || | || |||||| || |||||||| Sbjct 92718 CATTAAATAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCT 92659 Query 107247 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 | | | | |||||| || || ||||| ||||| || |||||||| Sbjct 92658 CAATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCAT 92610 Score = 96.9 bits (106), Expect = 4e-15 Identities = 251/373 (67%), Gaps = 10/373 (3%) Strand=Plus/Plus Query 106944 CTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTG 107003 |||| | ||| |||| || ||| | ||||| || | ||||||||||| || |||| | Sbjct 133073 CTTGTGTCACAAAGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATGATGCCATTGG 133132 Query 107004 ATTGACCATTTGTCCCC-CGA-ATACGAGATTTATTGGCTCTCACATCATG-GATGTGCA 107060 | ||| ||||| || ||| ||| ||| | || | | ||| | || ||| Sbjct 133133 AGGTACCGTTTGTTCCTGCGATATAAGAGCCAGA---GC-CACGAATCTTTTGAGCAGCA 133188 Query 107061 TC-CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 107119 | |||| ||| ||||| |||||||||| | |||||| || | ||| | ||||| Sbjct 133189 ACGCCAACACCGCCAGCAGACTTTGAGATACGAGCACACGTGGTGATAGTATCGTAGATG 133248 Query 107120 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 107179 || | ||| |||||| || | | |||||||||||| |||| || ||| | ||| Sbjct 133249 CCTTCGATACTGTCCTCTTTCATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGT 133308 Query 107180 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG-GGACATCTTGTC 107238 |||||||| ||||| | || ||||| || ||| | || || | | ||||| || Sbjct 133309 GTACCAGCGTTGAACAATGTAGGTGTAGCATGAGT-AAAGTATTTAGATGACATAAGATC 133367 Query 107239 GTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAA 107298 || || ||| | || | ||| | ||||| ||||| || || |||||||| | Sbjct 133368 ATAGGTTCTGAAGGCGCTTTCTAGGTCGTTACCGTGAATGCCAATAGCAACACGCATGAT 133427 Query 107299 CATGTATTGGGGT 107311 ||||||||| ||| Sbjct 133428 CATGTATTGAGGT 133440 >seq297 Length=22619 Score = 107 bits (118), Expect = 2e-18 Identities = 242/364 (66%), Gaps = 15/364 (4%) Strand=Plus/Plus Query 169162 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 169221 ||| ||| | || | ||| ||||||||||| || |||||||||| ||| |||||||| Sbjct 8981 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 9040 Query 169222 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 169281 | ||||| | ||||||||| || | ||| |||| || || | ||| || || |||| Sbjct 9041 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 9100 Query 169282 GACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAG 169341 |||| | || ||||| || || | |||| || |||| | || ||| Sbjct 9101 GACCAAGAATAGCCTTGATATTTTTTATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 9160 Query 169342 CGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAA 169401 | || ||||| ||| || ||||| | || || || ||||||| ||||| |||| Sbjct 9161 CATCACGGACGTTCAGCAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 9220 Query 169402 CGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGG 169461 | || || | ||| | |||| | || ||||||||||| || || | || || | Sbjct 9221 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTAATGATCAGAG 9280 Query 169462 TACA---------CTTTCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGG 169512 |||| |||||||| | | ||| || |||||| || |||||||||| Sbjct 9281 TACAGCGCTTGTTCTTTCCAG---GAAC---ACCGGCAAAGTTTGCATCTTCCAACTTGG 9334 Query 169513 GAAT 169516 |||| Sbjct 9335 GAAT 9338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976412017800