Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq80 210 3e-49 >seq80 Length=87281 Score = 210 bits (232), Expect = 3e-49 Identities = 314/445 (71%), Gaps = 3/445 (1%) Strand=Plus/Plus Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224 |||| || | ||| ||||| ||| ||| | ||||||||| | || ||||||||||| Sbjct 44537 TAAATAAAAGACAAGCAAAGTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGC 44596 Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284 || || || || ||||| | ||| | |||||| | |||||| || | ||||| || | Sbjct 44597 TGAATGTCAAACCGGGCATCAGACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAAC 44656 Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344 |||| ||||| |||||||| || || ||||| || ||||||||| | | ||| |||| Sbjct 44657 CAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACAAGACGTTCAGCAAAA---GAAC 44713 Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 | | ||||||||||| | |||||| |||||| || | ||| || || | Sbjct 44714 CGTTAGAGGAAATCCATTTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGT 44773 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || ||||| | | ||| |||| | ||| | |||||||| ||||| | | Sbjct 44774 CAATAGCAGAAAAGAGCATTTCTTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAA 44833 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 ||| || |||| | ||||||||||||||| || ||||| ||||| ||||| ||| Sbjct 44834 GACTGTAAGTTTCTGCGTGAATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAG 44893 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||||| | | || || | | |||| | | | | |||||||||||||| || |||| Sbjct 44894 CTTCAGGAATCTTGACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCAT 44953 Query 37585 CACTAGCTGCAAAGAAAGCAAGAAC 37609 | | | |||||||| || | ||| Sbjct 44954 CTGAACCAGCAAAGAAGGCCAAAAC 44978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592312394643800