Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq187 138 3e-27 >seq187 Length=46085 Score = 138 bits (152), Expect = 3e-27 Identities = 283/415 (68%), Gaps = 18/415 (4%) Strand=Plus/Minus Query 150402 TTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTA 150461 ||||||| || ||||| ||||| ||| || || || || || || | || ||| Sbjct 6548 TTGGTGAGCCTGGTGTGGGTAAGACAGCCATTGTCGAGGGCTTGGCTCGTCGTATCATCG 6489 Query 150462 ATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATTCTT-TCTTTGAATATGGGTGCA 150520 | |||| || || | ||| | | || ||| | || || ||| | ||||| || Sbjct 6488 AACGTGACGTGCCTCAGTCTCTCCA----GTGCAAACTGTTCTCATTGGACATGGGCGCC 6433 Query 150521 TTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAA 150580 || | ||||||| | ||||||||||||||||| ||||||||| | | | | | || Sbjct 6432 TTAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTCTTGAAA 6373 Query 150581 GAACTAAAAGAACGCGATGA---TGTTATTCTGTTCATCGATGAAATCCATACTATTATG 150637 ||| | || ||| || || | | ||| |||| || ||||||||||| ||| || | Sbjct 6372 GAAGTTAAGGAATCTGAAGAAGGTATCATTTTGTTTATTGATGAAATCCACACTGTTCTT 6313 Query 150638 GGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTA 150697 ||||| ||| | || | |||||| ||||| |||| || | |||||| || Sbjct 6312 GGTGCCGGT---AAAGGTGAGGGTTCTATGGATGCTGCCAATCTGCTGAAACCTATGCTG 6256 Query 150698 TCTCGCGGTGAAATTCGTGTCATCGGTGCAACA--ACCTACGATGAATATCGTAAACACA 150755 |||| |||||| | || |||||| || ||| || ||| |||||||||| || | Sbjct 6255 GCTCGTGGTGAACTGCGATGCATCGGCGCTACAACACTTAC--TGAATATCGTGAA---A 6201 Query 150756 TTGAAAAAGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAACC 150810 | ||||||||| | ||| | ||||||||||| ||||| ||| ||| ||||| Sbjct 6200 TCGAAAAAGATCCTGCATTCGAGCGTCGTTTCCAAAAGGTCGATGTTGGAGAACC 6146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147581651416310