Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq15 172 1e-37 >seq15 Length=177086 Score = 172 bits (190), Expect = 1e-37 Identities = 857/1345 (64%), Gaps = 46/1345 (3%) Strand=Plus/Minus Query 212733 TCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCT 212792 ||||| |||||||| |||||| | || |||| ||||| ||||||||| ||| ||| Sbjct 94186 TCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGTCTTGTAGAGGTCT 94127 Query 212793 TTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGC 212849 || | || | |||| || ||| | |||||| | ||| || | || ||| ||| Sbjct 94126 TTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTCAGCCATGATCATA 94067 Query 212850 TGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGG-CACT---TGACCAGGTG 212905 | | || || || |||||||| ||| | | || ||| | |||| Sbjct 94066 TTCTT---CACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAGTAACCA---- 94014 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 ||| ||||| || || | |||||||||||||| | | ||||||||| || ||||| Sbjct 94013 AGGATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGATGTGTA 93954 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 || || | | || ||| || || || || | |||| ||| || ||||| ||||| Sbjct 93953 AGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATAGGAGC 93894 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 ||||| ||| ||| | || || |||| | | || | || | |||||||| Sbjct 93893 AACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGTGCGGCCCAGTC 93834 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| ||| ||| || || ||||||||||| | |||| ||| || || Sbjct 93833 CCAA-----AGATTGGTAGGTGTG----ACATTCCACATGTCGTATTGCAGGATACCCTT 93783 Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205 | || |||||||| | || | |||||| |||| || | |||| |||||| || Sbjct 93782 GGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAAGA 93723 Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265 || | || |||||| | ||||||||||||||| || | |||| | || |||||| || Sbjct 93722 GGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCTTC 93663 Query 213266 TGGGGACGTGAAGGGCATCATCATGCG-TTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 ||| || ||| || || | | | | ||| || || | || || || || | Sbjct 93662 TGGTGAATCGAATGG-ATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACCTA 93604 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || || ||||| |||||| ||| || ||| || || | || || | ||| Sbjct 93603 AACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGC-TTCGATGACAGGATAGTAATTG 93545 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 || ||||||||||| | ||| | ||| || ||||| |||| | ||| | | | Sbjct 93544 ATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGG 93485 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 || | || | | | | | |||| | ||| || || ||| ||||| ||| Sbjct 93484 AAAT--CATACTTTTCTCTATTGAT-CACATAGGTAGGTAGAGCAATGGAGGCCAAGTTA 93428 Query 213504 CAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCAT 213563 || || || || || | || || ||| || | || || || |||||||||||||| Sbjct 93427 CAGACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTGCTGCAC 93368 Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATG 213623 ||| || |||| ||| || || || |||| ||| || |||||| ||||| ||| Sbjct 93367 TTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATG 93308 Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCT 213681 | || || ||||| || | | ||| | |||| ||| || | |||| Sbjct 93307 AATGGATTACCAGTCTCCGTTTGTGCCTCCA--AAATGGCATACCACAGCTTTTGAGCCT 93250 Query 213682 TGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATT 213741 ||| || ||||| | ||||| | ||| ||||| | |||| Sbjct 93249 TGATTGTTTCTCT---AGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAATT 93193 Query 213742 CGTGGCCCCAGAC--CCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCAGT 213798 ||| |||||||| | ||| | ||| ||| | || ||| || | || ||| | Sbjct 93192 CGTCACCCCAGACTTCATGT--AATCCAGGAGCTTCAT-TGGGGCAAAATAGAGACCAAT 93136 Query 213799 CCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGT 213858 | || | |||||||| | ||||||||| || || || ||||| || || |||||| | Sbjct 93135 CACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACAGAT 93076 Query 213859 CCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGT 213918 | | | || | ||||| ||| ||||||| |||| |||| |||| || |||| Sbjct 93075 CACGAGCTCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGT 93016 Query 213919 CCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGT 213975 | || ||||| || |||| ||| || || || ||||||| || | || ||||| || | Sbjct 93015 CTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGAT 92956 Query 213976 CCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTC 214035 | || | ||| ||||||| | || || | ||| | | |||||||| | | Sbjct 92955 CGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAGTAAC 92896 Query 214036 CGTTGGTTCCCGCTATATACGAGCC 214060 ||||||| || || || || || || Sbjct 92895 CGTTGGTGCCGGCAATGTATGATCC 92871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931525871724800