Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq187 84.2 5e-11 >seq187 Length=46085 Score = 84.2 bits (92), Expect = 5e-11 Identities = 178/259 (69%), Gaps = 15/259 (6%) Strand=Plus/Minus Query 48484 TAACTGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAAG 48543 ||| ||||||| | || || ||||||||||| ||||||||| | | | | | | |||| Sbjct 6431 TAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTCTTGAAAG 6372 Query 48544 AACTTAAAAAACGAGAA-AATGTA--ATTTTGTTCATTGATGAAGTACATATTATGATGG 48600 || |||| || ||| || ||| |||||||| ||||||||| | || | | | | | Sbjct 6371 AAGTTAAGGAATCTGAAGAAGGTATCATTTTGTTTATTGATGAAATCCACACTGTTCTTG 6312 Query 48601 GTGCTGGT---GGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCAC 48657 |||| ||| ||| || || ||||||||| |||| | |||||||| | Sbjct 6311 GTGCCGGTAAAGGT--GAG----GGTTCTATGGATGCTGCCAATCTGCTGAAACCTATGC 6258 Query 48658 TTTCACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACA 48717 | | |||||||| | || ||||| || ||||| | |||||||| ||| | Sbjct 6257 TGGCTCGTGGTGAACTGCGATGCATCGGCGCTACAACACTTACTGAATATCG--TGAA-A 6201 Query 48718 TTGAAAAAGATGCTGCATT 48736 | ||||||||| ||||||| Sbjct 6200 TCGAAAAAGATCCTGCATT 6182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106449164989640