Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq15 297 2e-75 seq297 123 3e-23 >seq15 Length=177086 Score = 297 bits (328), Expect = 2e-75 Identities = 1122/1734 (65%), Gaps = 46/1734 (3%) Strand=Plus/Plus Query 75222 TGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACAT 75281 || ||||||| || || ||||| ||||| || || |||||| | | | ||||||| Sbjct 92605 TGATCATGCGTGTTGCGATCGGTATCCATGGAACCGATATTGATGCAGCTATTGAGACAT 92664 Query 75282 ACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTA 75341 || || |||||| || | || | ||||| | || || | || ||||| || | Sbjct 92665 ACAACTTGATGTCTGAAAGATACTTTACACACGCTAGTCCTACTTTATTTAATGCAGGCA 92724 Query 75342 CACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACG 75401 |||| | || || ||||| ||| ||| | || ||| ||||| || || ||| | | Sbjct 92725 CACCTCGTCCCCAAATGTCTTCTTGTTTCTTGCTCACCATGAAGGAAGATTCGATCGAAG 92784 Query 75402 GTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGA 75461 ||||||||| || || | ||||| |||||||| ||| || || |||||||| Sbjct 92785 GTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCCAAGACAGCAGGCGGTATTGGCT 92844 Query 75462 TGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAG 75521 || |||| || | | | || | | ||| ||| || || || ||| | || Sbjct 92845 TGAACATTCACAACATTCGTGCTAGTGGATCATACATTGCCGGCACCAACGGTTACTCCA 92904 Query 75522 ATGGTATTATT-CCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCG 75580 | || |||||| || ||||| || || || ||| || || || ||||| |||||| Sbjct 92905 ACGG-ATTATTGCCCATGCTCCGTGTTTTCAACAATACGGCTCGTTATGTCGATCAAGGC 92963 Query 75581 GG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATC 75634 || ||||| ||| | |||| | ||||||||||| |||||||| || || Sbjct 92964 GGTAATAAGCGTCC---GGGCGCATTCGCAATGTACTTGGAACCCTGGCATGCAGACATT 93020 Query 75635 ATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCT 75693 | || | || || ||| ||| ||| | || || || | | | | ||||| Sbjct 93021 TTCACCTTTTTAGACTTGCGAAAAAACTTTGGTAAAGACGAAA-TCAGAGCTCGTGATCT 93079 Query 75694 CTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATG 75753 || | | || ||| |||| || ||||||||| |||| || || |||||| | || Sbjct 93080 GTTCTATGCTCTCTGGGTTCCTGATCTTTTCATGCAGCGTGTCAGAGACGGTGGTGATTG 93139 Query 75754 GTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGA 75813 |||||| || || || | | || || || | || | |||||| || |||| Sbjct 93140 GTCTCTATTTTGCCCCAATGAAGCTCCTGGATTACATGAAGTCTGGGGTGACGAATTTGT 93199 Query 75814 AGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGA 75873 || ||||| ||| || ||| || || ||||| | | || | | || | | | Sbjct 93200 TGCTCTCTATGAAAAATACGAACGTGAAGGAAGAGCTAGAGAAACAAT-CAAGGCTCAAA 93258 Query 75874 TGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACA 75932 | | ||| | || ||| | | |||| ||||||||||| | |||| || || || | Sbjct 93259 AGCTGTGGTATGCCATTTTGGAGGCACAAACGGAGACTGGTAATCCATTCATACTCTATA 93318 Query 75933 AGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATC 75992 ||||||||||||||| |||||||| || | || ||||| || |||||| || || | Sbjct 93319 AGGATGCTTGTAACAGAAAGAGTAATCAGCAAAACTTGGGTACGATCAAGTGCAGCAACC 93378 Query 75993 TTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCAT 76052 | || || |||||| | || ||| || | ||||| ||||| || || ||||| | Sbjct 93379 TGTGTACAGAAATTGTTGAATACTCAAGTCCTGATGAAGTCGCTGTCTGTAACTTGGCCT 93438 Query 76053 CAATCGCCCTTCCAAAGTATG---TCAATGAAGAGACTCGCACTTTTGATTATGAAAAAC 76109 | || || || || | |||| ||||| ||||| | | ||||| |||||| Sbjct 93439 CCATTGCTCTACCTACCTATGTGATCAAT--AGAGA----AAAGTATGATTTCCAAAAAC 93492 Query 76110 TTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTT 76169 | || || | || ||| || | || | ||| | ||| ||||||| | |||| | Sbjct 93493 TGCACGATGTTACCAAGGTTATCACTAGAAACTTGAACAAGATCATTGATATCAATTACT 93552 Query 76170 ATCCCGTTGAGACTGCGCGAAAG-TCTAATATGCGACACAGACCTATTGGTTTGGGTGTT 76228 |||| || || |||||| || || | | |||| ||||| |||||||| |||||| Sbjct 93553 ATCCTGTCATCGAAGC-CGAAAGATCCAACAAGAGACATAGACCGATTGGTTTAGGTGTT 93611 Query 76229 CAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAG 76288 |||||| | || || || || || || |||| |||||| ||||||||| Sbjct 93612 CAAGGTTTAGCCGACACTTTCATGGCCCTTCGTTATCCATTCGATTCACCAGAAGCCAAG 93671 Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA 76348 || |||| || |||||||||||||| || || || || |||| || ||| || Sbjct 93672 CAGTTGAACATTCAAATCTTTGAAACCATCTACCATGCTGCCTTGGAAGCCTCTTGCGAG 93731 Query 76349 TTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTG 76408 ||||||||| | || |||| || || | ||| || || | ||| | || | Sbjct 93732 TTGGCTGAAAAGTATGGACCCTACGAAACCTATGAAGGCAGCCCTGTATCCAAGGGTATC 93791 Query 76409 CTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC--TCAACTACGACTGGGATGTTCTCA 76466 || || | || |||| |||| || | ||| | | || | ||||||| | |||| Sbjct 93792 CTGCAATACGACATGT-GGAATGTCACACCTACCAATC-TTTGGGACTGGGCCGCACTCA 93849 Query 76467 AGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAG 76526 ||||| || || | ||| | |||||| ||| || | || || ||||| || | Sbjct 93850 AGGAAAAGATTGCCAAGCATGGTGTCCGTAACTCTCTGCTGGTTGCTCCTATGCCTACTG 93909 Query 76527 CCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCT 76586 ||||||| | ||||| | ||| |||||||| |||||||| |||||| | ||| | | Sbjct 93910 CCTCCACTTCTCAAATGCTCGGTTTCAATGAATGTTTTGAACCTTACACATCCAACTTTT 93969 Query 76587 ACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA--CAAG--CACCTCGTCAAT 76642 || | | ||| ||||||| | | || ||||| | | || ||| | Sbjct 93970 ACACCCGTCGTGTGCTCTCAGGTGAATATCAAATGGTCAATCCTTGGTTACTTCG----T 94025 Query 76643 GACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGT 76702 || || | || ||||||||| | ||| ||||| || | || || | || Sbjct 94026 GATCTAGTTGATATGGGTCTCTGGAATGACGATGTGAAGAATATGATCATGGCTGACGGA 94085 Query 76703 GGTTCCATTCAAAATAT-CTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGT 76761 || || ||||| || | | ||| ||||| | | | || | |||||| || || Sbjct 94086 GGATCTATTCAGAACGTGCCCAG-CATCCCTCAAAACTTGAAAGACCTCTACAAGACCGT 94144 Query 76762 GTGGGAAATCAAGATGAAAG--ATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATT 76819 ||||||||| | || | | ||||||||||||| || ||||||||| | ||| Sbjct 94145 CTGGGAAATC--TCTCAACGTACTATCATTGACATGGCTGCTGATCGTGGTGCGTATATT 94202 Query 76820 GATCAAAGTCAAAGTATGAATCTATTCATGG-AAAGTCCAACGATGTCCAAGCTCTCTTC 76878 || |||||||||||| |||| | || |||| | ||||| || |||||| | Sbjct 94203 GACCAAAGTCAAAGTTTGAACATCTTTATGGCTGAACCCAACTTTG-GTAAGCTCACCAG 94261 Query 76879 TATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 |||||| | || | ||| || |||| | || || || ||||| || || || Sbjct 94262 TATGCACTTTTATGGTTGGCAAAAGGGATTAAAGACAGGCATGTATTACCTTCG 94315 Score = 105 bits (116), Expect = 8e-18 Identities = 286/427 (67%), Gaps = 13/427 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || || |||||| ||||||| || || || ||||| ||||| | ||| | || | | Sbjct 133439 CCTCAATACATGATCATGCGTGTTGCTATTGGCATTCACGGTAACGACCTAGAAAGCGCC 133380 Query 75272 TTGGAGACATACGACAAGATGTCC-CAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 || || || || ||||| | | || || | ||| || ||||| || | || Sbjct 133379 TTCAGAACCTATGATCTTATGTCATCTAAATACTTT-ACTCATGCTACACCTACATTGTT 133321 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| ||||||||||| | ||| || |||| |||||||||||| | | || ||||| Sbjct 133320 CAACGCTGGTACACCTAAACCTCAATTGTCTAGTTGCTTCCTTGTTCAAATGAAAGAGGA 133261 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | || ||||| | ||| | || |||||| | |||||||||| ||||| Sbjct 133260 CAGTATCGAAGGCATCTACGATACTATCACCACGTGTGCTCGTATCTCAAAGTCTGCTGG 133201 Query 75451 GGGTATTGG-GATGCACATC-CATGATGTGAGAGCCAATAAATCTCGTAT-TCG-GGGGA 75506 ||| |||| | ||| || | ||| | | || | ||| ||| ||| || | Sbjct 133200 CGGTGTTGGCGTTGCTGCTCAAAAGATTCGTG-GC---TCTGGCTCTTATATCGCAGGAA 133145 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 |||| ||| || |||| || ||||||||||| | || ||||| | ||| || |||| Sbjct 133144 CAAACGGTACCTCCAATGGCATCATTCCAATGCTCAGAGTCTTTAATGACACTGCTCGCT 133085 Query 75567 ATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 ||| | |||| || || ||||| || | | || |||||| | ||||| |||| Sbjct 133084 TTGTGACACAAGGAGGTGGTAAACGCAACGGTAACTTTGCTGTCTACATAGAACCTTGGC 133025 Query 75624 ATGCCGA 75630 ||| ||| Sbjct 133024 ATGTCGA 133018 >seq297 Length=22619 Score = 123 bits (136), Expect = 3e-23 Identities = 212/305 (70%), Gaps = 2/305 (1%) Strand=Plus/Minus Query 13607 TGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCG-GGTCTCTC 13665 |||||||| || | ||||| |||||||| || || | || | ||| | ||| | || Sbjct 9284 TGTACTCTGATCATTACAGAAGGTGATTCAGCCAAGTCGCTTGTC-TTGAGTGGTATGTC 9226 Query 13666 TGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCG 13725 || ||||||||||| |||| ||||| ||||| |||| |||||| ||| || || Sbjct 9225 AGTAGTTGGTCGTGACTACTATGGTGTTTTCCCCATTCGTGGTAAACTGCTGAACGTCCG 9166 Query 13726 GGACGCTTCGGTGGCACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCT 13785 || | ||| || | |||| || | || | || || ||||| || || Sbjct 9165 TGATGTTTCTAATGCTGAACTCATGAAGAATGAAGAAATAAAAAATATCAAGGCTATTCT 9106 Query 13786 TGGTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTAT 13845 ||||||||| || || ||| | || || |||| ||| | || ||||||||| | || Sbjct 9105 TGGTCTTCAGCATGGTAAAAAGTATGAAAGTGTTGATGAGTTACGATATGGTCGTTTGAT 9046 Query 13846 GATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATCCTAAATATGAT 13905 ||| ||||||||| ||| |||||||||| || ||||||||||| ||| | || | || Sbjct 9045 GATCATGACAGATCAAGATCATGATGGTTCACATATCAAGGGTCTGATCATCAACTTTAT 8986 Query 13906 CCACT 13910 | ||| Sbjct 8985 CGACT 8981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565163013600