Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq57 131 3e-25 seq10 118 2e-21 >seq57 Length=110979 Score = 131 bits (144), Expect = 3e-25 Identities = 183/256 (71%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | ||||| |||| ||| | |||| || || || ||| Sbjct 11205 ATTTGCATACCACCACGGAGACGAAGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTA 11264 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||| || || | | ||| || | |||||| || ||||| || | | |||||| Sbjct 11265 TAGTCGCTTAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGA 11324 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || ||||| || ||||| ||||| ||||| ||| ||||| || ||| Sbjct 11325 TCAGGAGGAATACCTTCCTTGTCTTGAATTTTTTGTTTTACATTGTCGATAGTGTCAGAA 11384 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364 ||||| ||||||| ||| || || || || || || || || ||||| |||||||| || Sbjct 11385 GACTCGACTTCTAAAGTAATCGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATGATA 11444 Query 193365 ---TTAGTAAAATAAT 193377 ||| |||||||| Sbjct 11445 TATTTATAAAAATAAT 11460 >seq10 Length=205532 Score = 118 bits (130), Expect = 2e-21 Identities = 179/254 (70%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | ||||| |||| || | |||| || || || || Sbjct 110455 ATTTGCATACCACCACGAAGACGAAGGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTG 110396 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || || | | ||| || | |||||| || ||||| || | ||||||||| Sbjct 110395 TAGTCACTCAAAGTACGACCATCCTCAAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGG 110336 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || ||||| || ||||| || || || | |||| ||| |||| ||| Sbjct 110335 TCAGGAGGGATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAA 110276 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364 || || ||||||| ||| || || || || || || || ||||| || ||||||||||| Sbjct 110275 GATTCGACTTCTAAAGTAATCGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTTT 110216 Query 193365 TTAGTA--AAATAA 193376 | | || |||||| Sbjct 110215 TAAATAAGAAATAA 110202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899647708820400