Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq57 111 2e-19 seq10 102 1e-16 >seq57 Length=110979 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || ||| | |||||||| || ||||| ||||||||||| |||| Sbjct 11440 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACGATTACTTTAGAAGTCGAGTCTTCT 11381 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| | ||||| ||||| || ||||| || ||||| || ||| Sbjct 11380 GACACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 11321 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 ||| | | || | ||| ||||| || ||||||||| Sbjct 11320 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGAT 11285 >seq10 Length=205532 Score = 102 bits (112), Expect = 1e-16 Identities = 124/168 (74%), Gaps = 1/168 (1%) Strand=Plus/Plus Query 155811 TTATGTAATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAA 155870 |||| ||| ||||||||||| || | || || | || || || || ||||| |||||| Sbjct 110209 TTATTTAA-AAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACGATTACTTTAGAA 110267 Query 155871 GTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATA 155930 |||||| |||||||| ||| ||| || || | || || ||||| || ||||| || Sbjct 110268 GTCGAATCTTCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATC 110327 Query 155931 CCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 ||||| || ||||| ||| | || | ||| ||||| || || || ||| Sbjct 110328 CCTCCTGACCAACAGAGACTTATCTTTGCTGGTAAACAACTTGAGGAT 110375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731866556702000