Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq57 136 8e-27 seq10 123 5e-23 >seq57 Length=110979 Score = 136 bits (150), Expect = 8e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || ||||| | ||||| || || ||| ||||| || Sbjct 11211 ATACCACCACGGAGACGAAGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCG 11270 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || |||| || | |||||||||||||||||| | | ||||||||||| Sbjct 11271 CTTAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGA 11330 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| | ||||||||| |||| || || || || Sbjct 11331 GGAATACCTTCCTTGTCTTGAATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCG 11390 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||| || || ||||| | ||| || | ||| || ||||| Sbjct 11391 ACTTCTAAAGTAATCGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 11440 >seq10 Length=205532 Score = 123 bits (136), Expect = 5e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | || || || | |||| || || ||| || || ||| Sbjct 110449 ATACCACCACGAAGACGAAGGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCA 110390 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || |||| || | |||||||||||||||||| | ||||||||| ||||| Sbjct 110389 CTCAAAGTACGACCATCCTCAAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGA 110330 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || | || ||||| ||| ||| || ||||| Sbjct 110329 GGGATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCG 110270 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||||| |||||| || || || || | || || | || || |||||||| Sbjct 110269 ACTTCTAAAGTAATCGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTT 110217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984472494878250