Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq137 140 1e-27 seq156 107 6e-18 seq15 107 6e-18 seq124 95.1 4e-14 >seq137 Length=60552 Score = 140 bits (154), Expect = 1e-27 Identities = 210/292 (72%), Gaps = 10/292 (3%) Strand=Plus/Minus Query 302590 AAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACA 302649 |||||||||||||||||||| ||| | ||||| |||||||||||||| ||||| || Sbjct 13289 AAACGACGCTGAATATAACCTGTTTCTGCAGTTTTGACAGCTGTATCAATAAGACCTTCA 13230 Query 302650 CGACCACCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCCCCCCA-ATAAAGGAG 302706 ||||||||||||||||||||||| | || | |||| |||| | | |||| ||| Sbjct 13229 CGACCACCCATAGCATGGAAGAAGAATTCGGTAGGGGTC-AAGCCTCTGAGATAA--GAG 13173 Query 302707 CTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTC 302766 | || || |||||||| ||||| | || ||||| ||||| || || || Sbjct 13172 TTTTCGACAAAACCACGACTTTCGGGACTGTGATCATCCTTGGAGAAGTGAGGAAGAGTA 13113 Query 302767 CTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAA 302826 | | || ||||||| || |||||||| || |||||||| || || || | || | | Sbjct 13112 CGGAACTTGAAGCCGTAAGGAATACGCTTGCCTTCAACGTTTTGTTGACCGACACAAGCA 13053 Query 302827 ATCATCTGCGAAATATTTAAATCACTG--CCCTTGGAGCCAGCATTTACCAT 302876 ||| || ||||| || ||| | | ||||| || |||||| ||||||| Sbjct 13052 GACATTTGGGAAATGTT--AATGAAGGAACCCTTAGAACCAGCAATTACCAT 13003 Score = 102 bits (112), Expect = 2e-16 Identities = 114/148 (77%), Gaps = 7/148 (5%) Strand=Plus/Minus Query 301815 AATTTC-TTCAATACGGGGAACACCACGGGTTACGTTAG-ACTTGGACGCAACACCAGCA 301872 |||||| ||||| ||| || |||||| | |||||||| ||||| ||||||||| Sbjct 14082 AATTTCCTTCAA-ACGAGGTACACCAAGTGTTACGTTTTTACTTGAT----ACACCAGCA 14028 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 |||||||||||||||| || | ||||| | || ||||||||| ||| || ||||| Sbjct 14027 TAGTGGAAAGTATTCAGTGTCATCTGAGTGGCAGGTTCACCAATAGATTGAGCAGCAATA 13968 Query 301933 ATACCAACCATTTCTCCTGGTGCTACAA 301960 ||||||||||||| || || || |||| Sbjct 13967 GTACCAACCATTTCACCAGGAGCAACAA 13940 >seq156 Length=53805 Score = 107 bits (118), Expect = 6e-18 Identities = 386/594 (65%), Gaps = 20/594 (3%) Strand=Plus/Minus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463 || || |||||||| ||| ||||||||| || | || ||||| ||||||||| | || Sbjct 15831 GCCATCAGACCACAGATATCACACACATGAACACGATATGCATCTGATGCGTCAAACAGA 15772 Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523 || |||| ||| ||| |||| || |||||||||||||| | ||||||||||| Sbjct 15771 CGCTCCTTCAAGAATTGAGCAACACCATGGGAAATCATACAATCTCTTTCCATTTCACCA 15712 Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATA 251583 ||||| | ||||||||| | | | ||| ||| | || || | || | | | | Sbjct 15711 AAACGTAAACCACCATCTCTTGAACGACCTTCGACTGGTTGTCTTGTCAAGATCTGTACA 15652 Query 251584 GGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAAT 251643 || || | | || || || |||||| | |||||| || || | |||||| || | Sbjct 15651 GGTCCTCTTGCTCGACTGTGAATCTTATCGTCTACCATGTGTTTCAAACGCTGATAATAG 15592 Query 251644 GCGGGACCGATGAAGATGCTCGAAGGCATT-TGCT---CTCCAGTTAGAGCGTTATACAT 251699 | ||||| | || || || | |||||| ||| ||||| | | | |||||||| Sbjct 15591 GTTGGACCCAAGA--ATACTTG--GGCATTCAGCTTACGACCAGTAAAACCATTATACAT 15536 Query 251700 AACTTCGTTTCCATTAGATTCATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAAT 251759 ||||| ||| | || || ||| ||| | || | ||| | | | Sbjct 15535 GACTTCAAAACCACGTTGCTGGTATCCCTGTTCCTGCAATGCTTGTGAAATGGCTTCGAC 15476 Query 251760 CTTGAATTTGCTAAAACTGGTGCCG--TCTCCGTAAAGACCCATTTGAATCAACACTTTG 251817 | | | |||| ||||| || || || | | ||| | | ||||||| Sbjct 15475 AGTAACATCCGTAAA--TGGTGTCGCATCACCTTCATTACCAGTCAATGTTGACACTTTA 15418 Query 251818 CC---TAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGA 251874 || |||| | || ||| || | || ||||||||| |||||||| || ||| Sbjct 15417 CCAAGTAAACAT---TCAATCAAGTGACCAATTGTCATACGAGAAGGAATAGCGTGAGGA 15361 Query 251875 TTGATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA 251934 |||||||| | || ||| | | || ||||||| |||||| | || ||| | | ||| Sbjct 15360 TTGATGATCAAATCAGGTGTGATACCTTCAGCAGAGAAGGGGAAAT-CTTCTTGACGATA 15302 Query 251935 A-TGTTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | | | ||||| || || || || ||||||||||| |||||| ||||| || Sbjct 15301 AGTAATACCAATCGTACCTTTCTGACCGTGACGAGAGGCGAACTTGTCACCCAT 15248 >seq15 Length=177086 Score = 107 bits (118), Expect = 6e-18 Identities = 310/466 (67%), Gaps = 17/466 (4%) Strand=Plus/Plus Query 155912 ACGCTCCATAAATACATCACTCGCCCA-AATAGCATAGAAAAGGTCCCTTGC---CTTTG 155967 ||||| ||| || | |||| | |||| ||| || |||| | ||| | ||| | || Sbjct 132915 ACGCTTCATGAAAAGATCAGGCACCCATAATCCCA-AGAACAAGTCGCGTGCGCGCATT- 132972 Query 155968 ACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATA--TCAGGATGGTG 156025 |||||| | || | ||||| || | || |||||||| |||| || ||| Sbjct 132973 --TCCTCAGCACCATTGTTCTTGCGCAAGTCCAAGAATTCG--AATACGTCGACATGCCA 133028 Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTGCCACC--CTGATCT-ACATACCG 156082 || || | || | |||||| |||| || | || ||||| || | | ||| | || Sbjct 133029 AGGTTCTATGTAGACAGCAAAGTTACCGTTGCGTTTACCACCTCCTTGTGTCACAAAGCG 133088 Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142 |||||| | ||| ||||| | ||||| ||||| || |||||||| || || || ||||| Sbjct 133089 AGCAGTGTCATTAAAGACTCTGAGCATTGGAATGATGCCATTGGAGGTACCGTTTGTTCC 133148 Query 156143 -GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACC 156201 |||| ||| || ||||| |||| || ||| | | |||| ||| || | Sbjct 133149 TGCGA-TATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAGCAG 133207 Query 156202 ATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTT 156261 | || || || |||| || | | ||||| | | || ||||| ||| || |||| Sbjct 133208 ACTTTGAGATACGAGCACACGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCTCTT 133267 Query 156262 CCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTG 156321 |||| | || |||| | ||||||||| ||||| ||||||||||| | || Sbjct 133268 TCATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTGAACAATG 133327 Query 156322 TAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGT 156367 ||||||| |||||| |||| || ||| |||||| ||| || || Sbjct 133328 TAGGTGTAGCATGAGTAAAGTATTTAGATGACATAAGATCATAGGT 133373 >seq124 Length=65718 Score = 95.1 bits (104), Expect = 4e-14 Identities = 205/305 (67%), Gaps = 4/305 (1%) Strand=Plus/Plus Query 289026 TTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 |||||| | |||||||||||| || | ||||| | || || | ||| | | || | Sbjct 62190 TTTACCGATAGCATCAATTTCATCTACAAAAATGATGCATGGTGCATTCTTCTTGGCTGT 62249 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 |||||| || ||||||||||| || | |||| ||||||| ||||||| ||||| || || Sbjct 62250 TGCAAACAAGTCTCTTACACGAGACGAACCAACACCAACAAACATTTCAACAAACTCTGA 62309 Query 289146 AGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205 | | || || | ||| | ||| ||||| || ||| || | || || | ||| Sbjct 62310 ACCAGAGACACTCAAGAAGGGCACACCAGCTTCACCGGCTGTAGCTTTTGCGAGCAATGT 62369 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265 |||||||| || || || || || | | || || || | |||| ||| ||| Sbjct 62370 TTTACCTGTACCTGGGGGACCTGACAAAATGGCACCTTTAGGAATGGTTGCACCA--AGA 62427 Query 289266 C--TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323 | | ||| ||||| ||||||| |||| |||| ||| || ||| | || || Sbjct 62428 CGTTCATAAGCAGCAGGGTTCTTTAAGAATTTGACAAACTCCATAATTTCTTCCTTGGCT 62487 Query 289324 TCATC 289328 ||||| Sbjct 62488 TCATC 62492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471806379690515