Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq15 109 7e-18 seq316 98.7 1e-14 seq73 98.7 1e-14 seq80 91.5 2e-12 >seq15 Length=177086 Score = 109 bits (120), Expect = 7e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || ||||| || || ||||| | ||| || || ||||||||||||| | |||||||| Sbjct 92959 TGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAG 92900 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | ||||||||||| || | ||| | || || || | ||||| | ||||| Sbjct 92899 TAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCA 92840 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || ||||| || | ||||||||| | || || ||||||||| || ||||| || ||| Sbjct 92839 ATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCG 92780 Query 1630246 ATCGAGTCGGCCTTCATG 1630263 ||||| || |||||||| Sbjct 92779 ATCGAATCTTCCTTCATG 92762 Score = 89.7 bits (98), Expect = 6e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1630076 AGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGACTCGCCGTTGG 1630135 |||| || ||||| |||||||| | |||||| || | || ||| ||||| ||||| | Sbjct 133085 AGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATGATGCCATTGGAGGTACCGTTTG 133144 Query 1630136 TGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCGATGCCGCCGG 1630195 | || || | || | ||| | | | || | ||| || || |||| ||| | ||||| | Sbjct 133145 TTCCTGCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAG 133204 Query 1630196 CCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGG 1630255 | ||||| ||||| | || ||| ||| || ||||||||||| ||||| ||| Sbjct 133205 CAGACTTTGAGATACGAGCACACGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCT 133264 Query 1630256 CCTTCATGTCCACGAGAAAGCA 1630277 | ||||| | || || ||||| Sbjct 133265 CTTTCATTTGAACAAGGAAGCA 133286 >seq316 Length=19262 Score = 98.7 bits (108), Expect = 1e-14 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | ||| || || || ||||| ||||| || || | || Sbjct 14926 GCTTGGCGAGTTCACCAGGGAGGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGA 14985 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | |||| | ||| ||||| |||| || || | | Sbjct 14986 TGGTGGAACGCTTGTTGTAAGCAGCCAACTTGGAGGCTTCGGTAGCGATACGTTCAAAGA 15045 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||||||| ||||||| || ||||| | |||||||||||| || ||||||| Sbjct 15046 TATCATTGACAAAAGAGTTCAAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGT 15105 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | ||||||||||| | || ||||| Sbjct 15106 GGACTTGCTTCAAGACCTTGTAGATATAAGAGGAGTA 15142 >seq73 Length=91830 Score = 98.7 bits (108), Expect = 1e-14 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | ||| || || || ||||| ||||| || || | || Sbjct 249 GCTTGGCGAGTTCACCAGGGAGGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGA 190 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | |||| | ||| ||||| |||| || || | | Sbjct 189 TGGTGGAACGCTTGTTGTAAGCAGCCAACTTGGAGGCTTCGGTAGCGATACGTTCAAAGA 130 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||||||| ||||||| || ||||| | |||||||||||| || ||||||| Sbjct 129 TATCATTGACAAAAGAGTTCAAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGT 70 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | ||||||||||| | || ||||| Sbjct 69 GGACTTGCTTCAAGACCTTGTAGATATAAGAGGAGTA 33 >seq80 Length=87281 Score = 91.5 bits (100), Expect = 2e-12 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 868718 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGC 868777 || || |||||||||||||| | || ||||||| ||||| | || || |||| Sbjct 44281 TCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAATGGATTGGTA 44340 Query 868778 GTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATG 868837 | | |||| ||| ||| |||| || | | | || || || || || || |||||| Sbjct 44341 GCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAGACGATCAGCAACGAATTCGATG 44400 Query 868838 TACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACA 868897 ||||| ||||| | | | | ||||||||||||||| || || || || | || ||| | Sbjct 44401 TACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGCGACGGGAAGAGCATCCGTCAAA 44460 Query 868898 AACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932 || |||| || || ||| || || | |||||| Sbjct 44461 AATTCTTGTTCAATGCTGACAGCTTCCAAGATGAT 44495 Score = 87.8 bits (96), Expect = 2e-11 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 |||||| || |||| ||||| ||| ||||| || | | |||||||| || || || || Sbjct 44568 ACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAGACCACGTTT 44627 Query 869239 CTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297 |||||||||||||||| ||| || || ||||| ||||| || ||||| || |||| Sbjct 44628 TTTGAGCCAAAAGATGGAAGCA-AAGGAACCAGAGAAGAAGATACCTTCGACAGCAGCAA 44686 Query 869298 AGCCGATGAGCCGCTCGGCAAA 869319 || | | || || || ||||| Sbjct 44687 AGGCAACAAGACGTTCAGCAAA 44708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107090371513615