Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq9 102 1e-16 >seq9 Length=217876 Score = 102 bits (112), Expect = 1e-16 Identities = 178/259 (69%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 ||||||| | ||| | |||||||| || | ||||| || ||| ||| | | || Sbjct 8550 AAGAACTGCTTTGGTTCATTAAAGGAGATACAAACTCAAAGCATCTAAGTGAAAGAAATG 8609 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 | || ||||| ||| || |||||||| |||| | | || | || |||||| | Sbjct 8610 TCAAGATTTGGGATGGCAACGGTTCTCGCGAATATCTCGACAAGTTAGGTTTTACTCACC 8669 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 | ||||||||| | || ||| | || ||||||||||||||||| || || ||| Sbjct 8670 GTCGTGAAGGTGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAAT 8729 Query 172579 ATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTA 172638 | | || |||||||| ||||| ||||| ||||| | || |||||| ||| || Sbjct 8730 ACGTTGATTGTGATACTGATTATACAGGGCAAGGCATTGATCAATTACAACAAGTGATCG 8789 Query 172639 ATACTTTACAAAACAACCC 172657 | ||| || ||||||| || Sbjct 8790 ACACTATAAAAAACAATCC 8808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632484895858600