Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq316 154 2e-31 seq73 154 2e-31 seq15 127 3e-23 seq96 114 2e-19 seq80 107 3e-17 >seq316 Length=19262 Score = 154 bits (170), Expect = 2e-31 Identities = 190/257 (74%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||||||||| || |||||||||||| |||| ||||| || | | Sbjct 14887 TGTACTTGGTGACAGCCTTGGTACCTTCAGAGACGGCGTGCTTGGCGAGTTCACCAGGGA 14946 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || || || ||||| ||||| || || | ||| ||| |||||||| || Sbjct 14947 GGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAA 15005 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| ||||| |||| || || | || || |||||||| |||||| Sbjct 15006 GCAGCCAACTTGGAGGCTTCGGTAGCGATACGTTCAAAGATATCATTGACAAAAGAGTTC 15065 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || |||||||| || ||||| | |||||| Sbjct 15066 AAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGTGGACTTGCTTCAAGACCTTG 15125 Query 1485709 TAAACAAAGGACGAGTA 1485725 || | | | || ||||| Sbjct 15126 TAGATATAAGAGGAGTA 15142 >seq73 Length=91830 Score = 154 bits (170), Expect = 2e-31 Identities = 190/257 (74%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||||||||| || |||||||||||| |||| ||||| || | | Sbjct 288 TGTACTTGGTGACAGCCTTGGTACCTTCAGAGACGGCGTGCTTGGCGAGTTCACCAGGGA 229 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || || || ||||| ||||| || || | ||| ||| |||||||| || Sbjct 228 GGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAA 170 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| ||||| |||| || || | || || |||||||| |||||| Sbjct 169 GCAGCCAACTTGGAGGCTTCGGTAGCGATACGTTCAAAGATATCATTGACAAAAGAGTTC 110 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || |||||||| || ||||| | |||||| Sbjct 109 AAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGTGGACTTGCTTCAAGACCTTG 50 Query 1485709 TAAACAAAGGACGAGTA 1485725 || | | | || ||||| Sbjct 49 TAGATATAAGAGGAGTA 33 >seq15 Length=177086 Score = 127 bits (140), Expect = 3e-23 Identities = 177/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || |||||||| || ||||| | ||| || || ||||||||||||| | |||||||| Sbjct 92959 TGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAG 92900 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | ||||||||||| || | ||| | || || || | ||||| | ||||| Sbjct 92899 TAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCA 92840 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || ||||| || | ||||||||| | || || |||| |||||||| ||||| || ||| Sbjct 92839 ATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCG 92780 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 ||||| || |||||||| | || || || || || |||| || || | ||||| Sbjct 92779 ATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCT 92720 Query 2073781 GCATTGAA 2073788 ||||| || Sbjct 92719 GCATTAAA 92712 >seq96 Length=80948 Score = 114 bits (126), Expect = 2e-19 Identities = 172/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| ||||||||||| || ||||| |||||| |||| ||||| || | | Sbjct 62962 TGTATTTGGTGACAGCCTTGGTACCTTCAGAGACAGCGTGCTTGGCGAGTTCACCAGGAA 62903 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || || || || || || || || | ||| ||| |||||||| || Sbjct 62902 GAATGAGACGAACAGCAGTTTGAATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAA 62844 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| || || | || || || | || || |||||||| |||||| Sbjct 62843 GCAGCCAACTTGGAGGCTTCAGTAGCAATACGTTCAAAGATATCATTGACAAAAGAGTTC 62784 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || || ||||| || ||||| | |||||| Sbjct 62783 AAGATAGACATGGCCTTGTTGGAGATACCAGTATCAGGGTGAACTTGCTTTAAGACCTTG 62724 Query 1485709 TA 1485710 || Sbjct 62723 TA 62722 >seq80 Length=87281 Score = 107 bits (118), Expect = 3e-17 Identities = 224/333 (67%), Gaps = 12/333 (4%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 |||||| || |||| ||||||||| ||||| || | |||||||| || || || || Sbjct 44568 ACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAGACCACGTTT 44627 Query 794400 CTTGAGCCAAAAGATG---GCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||||||||||||||| ||| || || || ||||| ||||| || ||||| || || Sbjct 44628 TTTGAGCCAAAAGATGGAAGCAAAGGAA---CCAGAGAAGAAGATACCTTCGACAGCAGC 44684 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516 |||| | || || || || ||||||| || | | ||||| || | || Sbjct 44685 AAAGGCAACAAGACGTTCAGCAAAAG------AACCGTTAGAGGAAATCCATTTGAAGGC 44738 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 794576 ||| || |||||| || | | | || | ||||| || || |||||| || || Sbjct 44739 CCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTT 44798 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 ||| ||| |||| || ||||| || | || ||| || |||| ||| || || Sbjct 44799 CTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATATT 44858 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCAGTT 794669 ||| || ||| || |||||||| || || || Sbjct 44859 TTCAATCATGATTTGAAAGCCATAGAAACATTT 44891 Score = 98.7 bits (108), Expect = 2e-14 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 793926 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCC 793985 || || |||||||||||||| | || ||||||| ||||| | || || |||| Sbjct 44281 TCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAATGGATTGGTA 44340 Query 793986 GTCAGGTAGTGCTTCTCGCACCC--GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAA 794043 | || ||| ||| ||| | || |||| || || | || || || || |||||||| | Sbjct 44341 GCCATGTAAATCTTGTCGAATCCAAGAGCAAC-CATG-AGACGATCAGCAACGAATTCGA 44398 Query 794044 TGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGA 794103 ||||||| ||||| | ||| | ||||||||||||||| || ||||| || | || | | Sbjct 44399 TGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGCGACGGGAAGAGCATCCGTCA 44458 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 ||| |||| || || ||| || || | |||||| Sbjct 44459 AAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGAT 44495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916183107136205