Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq57 111 1e-19 >seq57 Length=110979 Score = 111 bits (122), Expect = 1e-19 Identities = 158/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| |||| || ||||| || ||||||||||| |||| | || |||| Sbjct 11229 AGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCT 11288 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||| || ||||| || || | || | || |||||||| Sbjct 11289 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 11348 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | ||||||||||| || || | ||||| ||| | |||||| || | || || Sbjct 11349 TGAATTTTTTGTTTTAC--AT--TGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAAT 11404 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATA 34981 |||||||| || || ||||| |||||||| ||||||||| Sbjct 11405 CGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATGATA 11444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690438218305