Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq57 156 3e-33 seq118 102 6e-17 seq24 89.7 4e-13 >seq57 Length=110979 Score = 156 bits (172), Expect = 3e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||||||||| || ||||| ||||| |||||||| || | ||| ||| Sbjct 11225 ACGAAGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACC 11284 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||||||||| |||||| | || | | ||| ||||| || |||||||| || || Sbjct 11285 ATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTT 11344 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||||||||| ||| | || | |||||||||| || ||||| | ||| || Sbjct 11345 GTCTTGAATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAAT 11404 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | || || ||||| || ||||| Sbjct 11405 CGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 11440 >seq118 Length=67844 Score = 102 bits (112), Expect = 6e-17 Identities = 120/160 (75%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629 ||| || ||||| ||||| || ||||| ||||||||||| ||||| | ||| ||| ||| Sbjct 19111 ACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAA-GGTACGAC 19053 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 || ||||||||||| || || | || | | ||| ||||| || || ||||| || | Sbjct 19052 CGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCT 18993 Query 29690 TGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGA 29729 | ||||| | ||||| |||||| | || | |||||||| Sbjct 18992 TATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAGA 18953 >seq24 Length=153386 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/161 (73%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629 ||| || || || || || || ||||| ||||| |||||||| || | ||| ||| ||| Sbjct 151803 ACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGCTCAA-GGTACGAC 151861 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 || ||||||||||| || ||| | || | | ||| || || || |||||||| || | Sbjct 151862 CGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCT 151921 Query 29690 TGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAA 29730 ||||||| | ||||| ||||| | || | ||||| ||| Sbjct 151922 TGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGGAA 151962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385216406558895