Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq118 86.0 6e-12 seq10 82.4 7e-11 >seq118 Length=67844 Score = 86.0 bits (94), Expect = 6e-12 Identities = 109/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||| || || || || || |||||||| | || || |||| ||| |||| Sbjct 19101 AAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGT--ACGACCGTCTTCGA 19044 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| ||||||| || || || || |||||||| |||||||| || || Sbjct 19043 GTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGA 18984 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTC 133600 |||||||||||| | |||| ||||| Sbjct 18983 TCTTTTGCTTGACATTGTCAATGGTGTC 18956 >seq10 Length=205532 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| || || || || || ||||| || | || || ||| | ||||| || Sbjct 110425 AAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCA-TCCTCAAG 110367 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || || || || | || || | ||| ||||| |||||||| ||||||||||| || Sbjct 110366 TTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAAT 110307 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||||||||||| | || | | || | | || || || | || | || ||||| Sbjct 110306 CTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTGCC 110247 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| |||||||| || ||||| Sbjct 110246 GGTAAGAGTCTTTACGAAGATTTGCAT 110220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417204557800