Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq10 111 4e-19 seq57 100 7e-16 seq15 98.7 2e-15 seq24 89.7 1e-12 >seq10 Length=205532 Score = 111 bits (122), Expect = 4e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || ||||| ||||| ||||| ||| |||||| | ||||| Sbjct 110235 AAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGAATCTTCTGATAGTATCGAAAAT 110294 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||||||||||||||| || ||||| || || ||| || ||||||||||| Sbjct 110295 GTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAGAGACTTATCTTT 110354 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || | || ||||| | |||||| || |||||| |||| || || ||| Sbjct 110355 GCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGACTACAACATCCAAAAGGAATCT 110414 Query 206365 ACTCTTCAC 206373 || |||||| Sbjct 110415 ACCCTTCAC 110423 >seq57 Length=110979 Score = 100 bits (110), Expect = 7e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || || || ||||| ||||| ||||| ||||| || ||||||| Sbjct 11437 CAAATCTTTGTCAAGACACTTACTGGAAAGACGATTACTTTAGAAGTCGAGTCTTCTGAC 11378 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| ||||| ||||| |||||||| || ||||| ||| || || ||| Sbjct 11377 ACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCAACAA 11318 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| || || || || | |||||||| | || | ||| || ||| || Sbjct 11317 CGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAACATC 11258 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || || || ||||||||||| Sbjct 11257 CAAAAGGAATCTACTCTTCA 11238 >seq15 Length=177086 Score = 98.7 bits (108), Expect = 2e-15 Identities = 172/248 (69%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || ||||| |||| ||||| || ||||| ||||| ||| ||| |||||||| | | Sbjct 93325 GCATCCTTATAGAGTATGAATGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATAC 93266 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | ||| || || | || ||| ||||||||||| ||||||| | |||||| Sbjct 93265 CACAGCTTTTGAGCCTTGATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAG 93206 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || | | || || | || | | ||| | | || |||||||| || || ||||| Sbjct 93205 AGAGCAACAAATTCGTCACCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAAT 93146 Query 173287 AGACTCCAATTTCCATCGGTCTC-GACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGC 173345 ||| ||||| ||| | ||||| ||| | || |||||| || || | | ||| | || Sbjct 93145 AGAGACCAATCACCA-CCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGC 93087 Query 173346 GTAGAACA 173353 ||||||| Sbjct 93086 ATAGAACA 93079 >seq24 Length=153386 Score = 89.7 bits (98), Expect = 1e-12 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||||| ||||| | || || ||||||||||||||||| || ||||| ||| || Sbjct 151964 AGTTCCGACACCATTGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCT 151905 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| ||| | |||||||| ||||| || || | ||||| || | || ||| ||| Sbjct 151904 GACCAACAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGCGAC 151845 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||| |||| || || |||||||| ||| | ||| | | ||||| Sbjct 151844 TATAACATCCAAAAGGAATCTACTCTCCACTTAGTTCTCCGTCTTCG 151798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181811790462995