Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq187 98.7 2e-15 >seq187 Length=46085 Score = 98.7 bits (108), Expect = 2e-15 Identities = 188/275 (68%), Gaps = 9/275 (3%) Strand=Plus/Minus Query 299037 GGTGCATTGACTGCTGGTACTAAGTATCGTGGTGAATTTGAAGAACGCATCGACAATTTG 299096 || || || | ||||||| | |||||||||||||||||||||||||| || | | | Sbjct 6438 GGCGCCTTAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTC 6379 Query 299097 CTAAAAGAACTAAAGAAACGTGAAAA---TACTATTGTTTTCATTGATGAAATTCATATT 299153 | |||||| | ||| || |||| | || ||| | || ||||||||||| || | | Sbjct 6378 TTGAAAGAAGTTAAGGAATCTGAAGAAGGTATCATTTTGTTTATTGATGAAATCCACACT 6319 Query 299154 ATGGTTGGGGCTGGTTCCGCAAGTAATGGTTCTATGGACATGAGCAATATGCTTAAGCCA 299213 | |||| || ||| | || | ||||||||||| |||| |||| || || Sbjct 6318 GTTCTTGGTGCCGGT---AAAGGTGAGGGTTCTATGGATGCTGCCAATCTGCTGAAACCT 6262 Query 299214 GCACTTTCACGTGGTGAGATTCGTGTAATTGGTGCAACAACATATGATGAATATCGTAAA 299273 || | |||||||| | || || || || |||||| | |||||||||| || Sbjct 6261 ATGCTGGCTCGTGGTGAACTGCGATGCATCGGCGCTACAACACTTACTGAATATCGTGAA 6202 Query 299274 AATATCGAGAAAGATAGTGCATTAACTCGTCGTTT 299308 ||||| |||||| |||||| |||||||| Sbjct 6201 ---ATCGAAAAAGATCCTGCATTCGAGCGTCGTTT 6170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115162698562055