Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq57 131 2e-25 seq15 109 5e-19 seq10 107 2e-18 seq118 98.7 9e-16 >seq57 Length=110979 Score = 131 bits (144), Expect = 2e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || || ||||| ||||| |||||||| | |||||| ||||||| Sbjct 11232 ACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCTTCG 11291 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || |||||||| | | |||| ||||| |||||||| ||||| || ||||| || || | Sbjct 11292 AGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 11351 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||||||||| | | || | ||| || | | ||| ||||| | || | ||| || Sbjct 11352 ATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCGTCTTT 11411 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATGACTTATT 132131 ||||| || || || | || || ||||||| |||| Sbjct 11412 CCAGTAAGTGTCTTGACAAAGATTTGCATGATATATT 11448 >seq15 Length=177086 Score = 109 bits (120), Expect = 5e-19 Identities = 337/510 (66%), Gaps = 11/510 (2%) Strand=Plus/Minus Query 147886 ATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCC 147942 ||||| || ||||||||||| | ||| | || | || || |||||| ||||| Sbjct 93019 ATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCT 92960 Query 147943 TGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCA 148002 || ||||||| || || | ||||| || || || | |||||| | ||| | | | Sbjct 92959 TGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGG-A 92901 Query 148003 GTG-CCGTTGGTGGAATTGATCT-TGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGC 148060 || ||||||||| || | || | || | || || | | ||| | ||| | || Sbjct 92900 GTAACCGTTGGTGCCGGCAATGTATGAT-CCACTAGCACGAATGTTGTGAATGTTCAAGC 92842 Query 148061 CAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCG 148119 |||| ||||| || || ||| || || ||| || | ||| ||||| || Sbjct 92841 CAATACCGCCTGCTGT-CTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCT 92783 Query 148120 TCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTT 148179 ||||| || | || | | ||||| ||||| ||| ||||||| ||| | || Sbjct 92782 TCGATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTG 92723 Query 148180 CCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATAC 148239 || || || | || ||||| ||||| ||||| || ||| | ||||| | || Sbjct 92722 CCTGCATTAAATAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTAT 92663 Query 148240 GTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATG 148299 ||||||||||| | || || ||| || || || || | ||| || ||||||| || Sbjct 92662 GTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAA 92603 Query 148300 TGCTGTGGTCGTTCGGCAA-CTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGT 148358 || || || ||||| |||| |||| || ||||||||||| || | |||||||| Sbjct 92602 TGTTGAGGACGTTCAGCAATCTTGCC-GTCAATCTTGAGAAGGTAAGAACGCTCGAGGGT 92544 Query 148359 TTTGTAACCAAAGTACTTGTAATCAAAATC 148388 |||| |||||||| | ||||| | ||||| Sbjct 92543 TTTGAAACCAAAGAAGTTGTACTTGAAATC 92514 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 146863 AGTTTAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACA 146922 |||| ||||||||||| | ||||| ||| ||||| | ||| || || || | ||| Sbjct 131782 AGTTCAATGAGGTCATTCAGTAAATGCTGGTTGACTATTTGGAATTCACCACTTTGAACA 131841 Query 146923 CGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGG 146982 || | ||| | |||||||||| |||||||||| | || |||||||| |||||||| Sbjct 131842 CGACGCGTATAAATATTGCTAGTGTAAGGCTCAAAGCATTCGTTATTGCCCAATATTTGA 131901 Query 146983 GCCGTGGTTGCGGTAGGCAT 147002 ||| | || |||||||| Sbjct 131902 CTAGTGCTAGCAGTAGGCAT 131921 >seq10 Length=205532 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | || || ||||| ||||||||||| |||| ||||| ||| || Sbjct 110428 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCA 110369 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || |||||||| | | |||| || | |||||| || ||||| || ||||| || || | Sbjct 110368 AGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGA 110309 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||||| || | | ||| | | |||| | | || ||||| | || | ||| || Sbjct 110308 ATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTG 110249 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| |||| ||| || ||||| Sbjct 110248 CCGGTAAGAGTCTTTACGAAGATTTGCAT 110220 >seq118 Length=67844 Score = 98.7 bits (108), Expect = 9e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | | || || |||||||||||||| || |||| |||||| ||||| Sbjct 19105 AACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTC 19046 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| |||||||||| | || ||||| |||||||| ||||| || ||||| ||||| Sbjct 19045 GAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATC 18989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476607655204200