Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq57 98.7 8e-16 seq10 87.8 1e-12 >seq57 Length=110979 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || ||| | ||||| ||||| ||||| | ||| || | Sbjct 11440 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACGATTACTTTAGAAGTCGAGTCTTCT 11381 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || | | | | || |||||||||||| ||||| ||||| | || ||||||| Sbjct 11380 GACACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 11321 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || || | ||| || |||||| | |||||| | || | |||| || ||| Sbjct 11320 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAAC 11261 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || ||||| |||||||| || ||||| || Sbjct 11260 ATCCAAAAGGAATCTACTCTTCATTTGGT 11232 >seq10 Length=205532 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 106253 TTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGA 106312 || |||||||||||| || || || || | || |||||||| ||||| | ||| || Sbjct 110213 TTAAAAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGA 110272 Query 106313 ACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGT 106372 | | ||| | | | | || || ||||| ||| ||||| ||||| | || Sbjct 110273 ATCTTCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCC 110332 Query 106373 TGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGA 106432 ||| ||||| || ||||| | ||| || |||||| | || ||| | ||| || | || Sbjct 110333 TGACCAACAGAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGA 110392 Query 106433 TTACAACATACAAAAAGAATCTACACTACATTTAGT 106468 |||||||| ||||| |||||||| || || || || Sbjct 110393 CTACAACATCCAAAAGGAATCTACCCTTCACTTGGT 110428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402326682481760