Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq15 123 4e-22 seq316 122 1e-21 seq73 122 1e-21 >seq15 Length=177086 Score = 123 bits (136), Expect = 4e-22 Identities = 176/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 259934 TTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCC 259993 |||||||| ||||| || || || || | || || || || || | |||||||| Sbjct 92712 TTTAATGCAGGCACACCTCGTCCCCAAATGTCTTCTTGTTTCTTGCTCACCATGAAGGAA 92771 Query 259994 GATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCC 260053 ||||||||||| || |||||||| |||||||| || || | ||||||||| | || Sbjct 92772 GATTCGATCGAAGGTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCCAAGACAGCA 92831 Query 260054 GGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACC 260113 ||||| || || || | ||||| | || || || | ||| | || |||||| Sbjct 92832 GGCGGTATTGGCTTGAACATTCACAACATTCGTGCTAGTGGATCATACATTGCCGGCACC 92891 Query 260114 AACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTAC 260173 ||||| | |||||||| | |||||||||| || ||||| ||| | ||||| || || Sbjct 92892 AACGGTTACTCCAACGGATTATTGCCCATGCTCCGTGTTTTCAACAATACGGCTCGTTAT 92951 Query 260174 GTCGACCA 260181 ||||| || Sbjct 92952 GTCGATCA 92959 >seq316 Length=19262 Score = 122 bits (134), Expect = 1e-21 Identities = 174/244 (71%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | |||||||||||| | ||||| || |||||| |||| | ||| Sbjct 15142 TACTCCTCTTATATCTACAAGGTCTTGAAGCAAGTCCACCCCGATACCGGT-----ATC- 15089 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| ||||||| |||||||| || || | || || |||| Sbjct 15088 TCCAACAAGGCCATGTCCATCTTGAACTCTTTTGTCAATGATATCTTTGAACGTATCGCT 15029 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 ||||| ||| |||| | ||||||||| ||| ||| | || || ||| Sbjct 15028 ACCGAAGCCTCCAAGTTGGCTGCTTACAACAAGCGTTCCACCATCTCTTCTCGTGAAATC 14969 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 || ||||| || || || ||| | | || ||||| |||| |||||||||||| || || Sbjct 14968 CAAACCGCTGTTCGTCTCATCCTCCCTGGTGAACTCGCCAAGCACGCCGTCTCTGAAGGT 14909 Query 725139 ACCA 725142 |||| Sbjct 14908 ACCA 14905 >seq73 Length=91830 Score = 122 bits (134), Expect = 1e-21 Identities = 174/244 (71%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | |||||||||||| | ||||| || |||||| |||| | ||| Sbjct 33 TACTCCTCTTATATCTACAAGGTCTTGAAGCAAGTCCACCCCGATACCGGT-----ATC- 86 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| ||||||| |||||||| || || | || || |||| Sbjct 87 TCCAACAAGGCCATGTCCATCTTGAACTCTTTTGTCAATGATATCTTTGAACGTATCGCT 146 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 ||||| ||| |||| | ||||||||| ||| ||| | || || ||| Sbjct 147 ACCGAAGCCTCCAAGTTGGCTGCTTACAACAAGCGTTCCACCATCTCTTCTCGTGAAATC 206 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 || ||||| || || || ||| | | || ||||| |||| |||||||||||| || || Sbjct 207 CAAACCGCTGTTCGTCTCATCCTCCCTGGTGAACTCGCCAAGCACGCCGTCTCTGAAGGT 266 Query 725139 ACCA 725142 |||| Sbjct 267 ACCA 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177753811156390