Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq57 127 2e-24 seq10 116 4e-21 seq24 104 2e-17 seq118 98.7 1e-15 seq15 89.7 5e-13 >seq57 Length=110979 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || ||||||||||| ||||| ||||||| | ||| || || ||||| ||| Sbjct 11238 TGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCTTCGAGTTGT 11297 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| || | ||| || ||||| || || || ||||| || |||||||||||| Sbjct 11298 TTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATTTTT 11357 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| || ||| | ||||| || || || || || | |||||| || || || || Sbjct 11358 TGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCGTCTTTCCAGTA 11417 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || || || |||||||| Sbjct 11418 AGTGTCTTGACAAAGATTTGCAT 11440 >seq10 Length=205532 Score = 116 bits (128), Expect = 4e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| ||||||||||| | | || || || || || || Sbjct 110423 GTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCAAGTTG 110364 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||| || | | ||| || || || || || ||||| || |||||||| || Sbjct 110363 TTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTT 110304 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||| ||||| || | | || || ||||| || || | |||||| || || ||||| Sbjct 110303 TTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTGCCGGT 110244 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTT 134716 | ||| || ||||| ||||||||||| Sbjct 110243 AAGAGTCTTTACGAAGATTTGCATTTT 110217 >seq24 Length=153386 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| ||||| ||||||| | ||| || ||| ||||| || Sbjct 151815 GTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGCTCAAGGTACGACCGTCTTCGAGTTG 151874 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||| || | ||| || || || || || || ||||| || |||||||| || Sbjct 151875 TTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTT 151934 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGA 134656 ||| ||||| ||| | |||||||| Sbjct 151935 TTGCTTGACGTTGTCAATGGTGTCGGA 151961 >seq118 Length=67844 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || |||||||||||||||||||| || | | ||| || ||| ||||| || Sbjct 19099 GTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCGAGTTG 19040 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || ||||| | ||| || ||||| || || || ||||| || ||||| || || Sbjct 19039 TTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTT 18980 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGA 134656 ||| ||||| ||| | ||||| || Sbjct 18979 TTGCTTGACATTGTCAATGGTGTCAGA 18953 >seq15 Length=177086 Score = 89.7 bits (98), Expect = 5e-13 Identities = 356/558 (64%), Gaps = 2/558 (0%) Strand=Plus/Plus Query 8719 TACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAAT 8778 |||||| | || | |||||||||| | || || |||||||||||||||||||| Sbjct 93753 TACGAAACCTATGAAGGCAGCCCTGTATCCAAGGGTATCCTGCAATACGACATGTGGAAT 93812 Query 8779 GTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGT 8838 ||||| || ||| | | ||| | ||| || | || || ||||| | ||| Sbjct 93813 GTCACACCTACCAATCTTTGGGACTGGGCCGCACTCAAGGAAAAGATTGCCAAGCATGGT 93872 Query 8839 TTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGA 8898 | || || || ||| |||| ||| ||||| || ||| | ||| ||||||| | || Sbjct 93873 GTCCGTAACTCTCTGCTGGTTGCTCCTATGCCTACTGCCTCCACTTCTCAAATGCTCGGT 93932 Query 8899 AACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGC 8958 ||| |||| ||||| || | ||| |||| | ||| | || ||| | | || Sbjct 93933 TTCAATGAATGTTTTGAACCTTACACATCCAACTTTTACACCCGTCGTGTGCTCTCAGGT 93992 Query 8959 GATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAAGCGGGCGTTTACGAC 9018 || | | |||| | |||| | || | || || | | || ||| | | | Sbjct 93993 GAATATCAAATGGTCAATCCTTGGTTACTTCGTGATCTAGTTGATATGGGTCTCTGGAAT 94052 Query 9019 GACAAAATGCGCGATGCCATCGTGGAAGCCAACGGCAGCGTTCAGAACATTGACGCGGTG 9078 ||| | || || ||| ||| | | || |||||||| | | | Sbjct 94053 GACGATGTGAAGAATATGATCATGGCTGACGGAGGATCTATTCAGAACGTGCCCAGCATC 94112 Query 9079 CCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATC 9138 |||||| || | ||||| || || || ||||| |||||||| ||| | || | || Sbjct 94113 CCTCAAAACTTGAAAGACCTCTACAAGACCGTCTGGGAAATCTCTCAACGTACTATCATT 94172 Query 9139 GGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTA 9198 | ||||||||| ||| | || || | |||||| || |||||| ||| ||| | || | Sbjct 94173 GACATGGCTGCTGATCGTGGTGCGTATATTGACCAAAGTCAAAGTTTGAACATCTTTATG 94232 Query 9199 GCCGCACC-AACTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTT 9257 || | ||| ||||| | | | | |||| || || | || |||| ||| ||| || Sbjct 94233 GCTGAACCCAACTTTGG-TAAGCTCACCAGTATGCACTTTTATGGTTGGCAAAAGGGATT 94291 Query 9258 AAAAACAGGCATGTACTA 9275 ||| ||||||||||| || Sbjct 94292 AAAGACAGGCATGTATTA 94309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505394641099400