Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq66 122 1e-22 >seq66 Length=102801 Score = 122 bits (134), Expect = 1e-22 Identities = 252/373 (68%), Gaps = 4/373 (1%) Strand=Plus/Plus Query 161291 GGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTA 161350 ||| | || ||| | || ||| |||| || || || || ||| | ||||| ||| Sbjct 12682 GGTTTAACCGATCGTGTTCGTTTCTATCAAGCTTCTACTTCTGAACTCTATGGTAAAGTA 12741 Query 161351 CAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCT 161410 || ||||| || || ||||| ||||| ||||| || || ||||| ||||| ||||| Sbjct 12742 GTTGAAACACCCCAAAAGGAAACGACACCCTTCTATCCCCGTTCTCCTTATGGTGTAGCC 12801 Query 161411 AAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGT 161470 || || ||||| ||||||||| |||||| | || || ||| ||| || Sbjct 12802 AAGCTTTATGGCTATTGGATTACGGTCAACTACCGTGAATCATACAACATGTTTGCCTGT 12861 Query 161471 AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAG 161530 | |||||||| ||||||||||| || || || || ||| || ||||| ||||| ||| Sbjct 12862 AACGGTATTCTCTTCAACCATGAATCGCCTCGTCGTGGTCGTACCTTCGTTACCCGAAAG 12921 Query 161531 ATTACTAGGGGACTATCCCGTATTAGTAC--AGGACTACAGGATTGTCTATACCTAGGTA 161588 |||| | | | || | | | || |||| || || || || || || |||| Sbjct 12922 ATTAGTCGTG--CTGTTGCAGACATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTA 12979 Query 161589 ATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGA 161648 || | | | | || |||||||| |||||| || ||||| |||| ||||||| | | Sbjct 12980 ATATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAGGGTATGTGGCTCA 13039 Query 161649 TGTTACAACAGGA 161661 || | || || || Sbjct 13040 TGCTGCAGCAAGA 13052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729924171148600