Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq15 488 8e-133 seq80 217 2e-51 >seq15 Length=177086 Score = 488 bits (540), Expect = 8e-133 Identities = 1382/2102 (66%), Gaps = 42/2102 (2%) Strand=Plus/Minus Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462 |||||| || || ||||| || || || | || ||| || || || |||||||| Sbjct 94319 TGTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAACCATAAAAGTGCATACT 94260 Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522 || || || | | | || || || ||| || |||| ||||||||| || || Sbjct 94259 GGTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAAT 94200 Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582 | || || | ||| || ||||| | || ||| | ||||| |||||||| | || Sbjct 94199 ATACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGT 94140 Query 68583 CTTAAAAATCTGTTTGATATCATCTGGAAGGCTCGTA---TTTTGAATGGATCCACCATC 68639 ||| | | | ||| | | | || | ||| | || ||||| ||||| || || Sbjct 94139 CTTGTAGAGGTCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTC 94080 Query 68640 GGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAG 68699 | || || |||||||| | || |||||||| | | || || | | | ||| Sbjct 94079 AGCCATGATCATATTCTTCACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAG 94020 Query 68700 GAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACT 68759 | ||||| || |||||| |||| || || | ||| | ||| ||||||| || Sbjct 94019 TAACCAAGGATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGA 93960 Query 68760 GGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCAT 68819 || || ||||| | | ||||||| || || ||||||| ||| || ||||| ||||| Sbjct 93959 TGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCAT 93900 Query 68820 AGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTT 68879 ||| || |||| | | || | | |||||| | || || || || || Sbjct 93899 AGGAGCAACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGTGCGGC 93840 Query 68880 CCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACT 68939 ||| |||||||||| | ||| |||||||| | |||||||| || || || || Sbjct 93839 CCAGTCCCAAAGATTGGTAGGTGTGACATTCCACATGTCGTATTGCAGGATACC----CT 93784 Query 68940 TGCATAT---GATCCATT-ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAAC 68995 || ||| | | | || ||| ||||| || ||||| | || |||||| | || ||| Sbjct 93783 TGGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAAG 93724 Query 68996 TTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCT 69054 || || || ||| | | || || ||||| || || | | || | | |||| ||| Sbjct 93723 AGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTG-GCT 93665 Query 69055 TCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCA 69114 ||| | ||||||||||||| | | || || | || || || || ||||| || Sbjct 93664 TCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACCT 93605 Query 69115 ATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTA 69174 | ||| || |||||||||||||| || || ||||| ||||| | |||||| ||||| Sbjct 93604 AAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAATTG 93545 Query 69175 ATATCTATAATTTTATTAAGATTTCGGACTACTA--CTT--TAACCACGTCCTTTAGTTT 69230 ||||| || || || || | |||| | | || ||| |||| ||| | ||||| Sbjct 93544 ATATCAATGATCTTGTTCAAGTTTCT-AGTGATAACCTTGGTAACATCGTGC---AGTTT 93489 Query 69231 GAGAAAATCAAA---TCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATT 69287 | |||||| | | || || || ||| | || || || | || || | || Sbjct 93488 TTGGAAATCATACTTTTCTCTATTGATCACATAGGTAGGTAGAGCAATGGAGGCCAAGTT 93429 Query 69288 ACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACA 69347 ||| || || || |||| || | ||| |||| | || |||||||| || || || || Sbjct 93428 ACAGACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTGCTGCA 93369 Query 69348 TTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAAT 69407 ||||| || |||| |||||||||||||||||| ||||||| || ||||| || || || Sbjct 93368 CTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTAT 93309 Query 69408 AAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATT 69467 || ||| ||||||| || | || | || | ||| | | ||| | ||| || Sbjct 93308 GAATGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGAGCCTT 93249 Query 69468 TATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCA 69525 ||| | | | || | |||| || ||| |||| | ||| || | ||||| Sbjct 93248 GATT--GTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAATTCG 93191 Query 69526 TCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCA 69585 || ||||| || |||| ||||||||| |||||| || || | | ||||| || || Sbjct 93190 TCACCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATCACCA 93131 Query 69586 TCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCT 69644 | || | || || | ||| || ||||| |||| ||| ||||| ||| || ||||| | Sbjct 93130 CCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGC-ATAGAACAGATCACG 93072 Query 69645 GGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGA 69704 | ||| |||| || || || |||||| | || | ||| | ||| || | Sbjct 93071 AGCTCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTCTGC 93012 Query 69705 ATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTAT 69764 |||||| ||||| | || || || | | ||||| || ||||| || || ||||| | Sbjct 93011 ATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCGAC 92952 Query 69765 GTATCTGGCAGTGTTATTATAGACTCTCAGCATCGG-AATAATACCATTAGATTTACCAT 69823 || | || || || || | || | ||||| || |||||| || || || | ||| | Sbjct 92951 ATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGGAGTAACCGT 92893 Query 69824 TTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTC 69883 | || || | ||| || ||| || || ||||| || ||| | || || || | Sbjct 92892 TGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCGC 92833 Query 69884 CTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTAT 69943 |||| | || |||||| ||||||| ||| | || ||||| ||||| || || || Sbjct 92832 CTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAAT 92773 Query 69944 CATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAA 70003 | || ||||| | || | ||||| ||||||||| || | || || ||||||| Sbjct 92772 CTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATTAA 92713 Query 70004 ATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAG 70063 |||| |||||| ||||| || || || ||||||| | || |||||||| ||||||| Sbjct 92712 ATAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAG 92653 Query 70064 CTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTC 70123 ||| || ||||| ||| || || ||||| |||||||| | || ||| ||||| | Sbjct 92652 CTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGAGGAC 92593 Query 70124 GTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAA 70183 |||| | | || | || || | ||||| || || || ||||| || |||| Sbjct 92592 GTTCAGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGGTTTTGAAACCAA 92533 Query 70184 AATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA---GTTTATCCTT 70238 | ||||||| ||||| || | || || || ||| |||| || | | | | | || Sbjct 92532 AGAAGTTGTACTTGAAA--TCACGGTCATAGATGATAGCAGAGTTCAAGCGGTCAGCGTT 92475 Query 70239 ATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTT 70298 || || ||| | | | | || || ||||| || || || |||| || | || Sbjct 92474 ATCCATGACGACTTTGTACGTTTCATTA---GAGATCATGGGTGAGTGTTTGCCTGTCTT 92418 Query 70299 AGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTT 70358 ||||| ||||| ||| | || ||||| ||||| | | ||| | ||||| |||||||| Sbjct 92417 GGGATTCACATAATTGTACAAGTCTTCGATTACTTGAGAAAAGACCTTTTTGGTTTCCTT 92358 Query 70359 GTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGT 70418 ||| | ||| || ||||| || | || || | | |||||| |||||||| | || || Sbjct 92357 GTGAAGATTAGAAATGGCAATGCGCGCAGCCAACAGAGCATAATCAGGATGGCGAGTGGT 92298 Query 70419 ACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 | ||| ||| |||| ||||| | |||| | ||| | ||||||||| || | || Sbjct 92297 CATATAAGCAGCTGTTTCTGCAGCAAGGTTATCGAGTTCAACAGTTGTAACACCTTGGTA 92238 Query 70479 TA 70480 || Sbjct 92237 TA 92236 >seq80 Length=87281 Score = 217 bits (240), Expect = 2e-51 Identities = 552/836 (66%), Gaps = 13/836 (2%) Strand=Plus/Plus Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 ||| || ||| || || || || || || || || ||||||| | || || | || Sbjct 44259 TTGATAATCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 44318 Query 39388 CATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAA 39447 ||| || ||||| ||||| || || | || | || | ||||| | | || | Sbjct 44319 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAG 44378 Query 39448 TCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 39507 | ||| ||||| ||||| ||||| ||||| || | ||||| || ||||| Sbjct 44379 ACGATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGC 44438 Query 39508 AACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT--TATC 39565 || || ||||| ||||| | ||| |||| ||| ||| || || || || |||| Sbjct 44439 GACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATC 44498 Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625 || || || | || || | | | ||| |||| | | || || ||| Sbjct 44499 CTTG--ACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAG 44556 Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685 ||| ||| || || ||||| | || || ||||| || ||||| | || ||||| Sbjct 44557 TCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATC 44616 Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745 |||||||| |||||||||||||| |||| |||||| || ||||| |||||||| ||||| Sbjct 44617 AGACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCG 44676 Query 39746 ACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTTC 39802 || || ||||| |||||||| | || | || | | | ||| ||||| || Sbjct 44677 ACAGCAGCAAAGGCAACAAGACGTTCAGCAAAA---GAACCGTTAGAGGAAATCCATTTG 44733 Query 39803 TGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAA 39862 ||||||||||| || |||| | |||||| || || || |||||| |||||| Sbjct 44734 AAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATT 44793 Query 39863 TGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGG 39922 | ||| || | | ||||| | ||| || || || || ||||| || |||||| || Sbjct 44794 TCTTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGA 44853 Query 39923 ATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCT 39982 || ||||||||| || ||||| || || |||||| | ||||||| ||| | || || Sbjct 44854 ATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCA 44913 Query 39983 GAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCC 40042 |||||| ||| |||| |||||||| || || ||||| | | ||||| || ||| Sbjct 44914 TCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCC 44973 Query 40043 AATAC---ATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATA 40099 || || | ||| ||| || | |||| || || | ||| |||| | Sbjct 44974 AAAACGCGAGAGATAAAGAAACGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGG 45033 Query 40100 TCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTA 40155 || || | ||| | |||||||||||||||||| || || || || || || || Sbjct 45034 TCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 45089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686903691115800