Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq187 98.7 2e-15 >seq187 Length=46085 Score = 98.7 bits (108), Expect = 2e-15 Identities = 188/275 (68%), Gaps = 9/275 (3%) Strand=Plus/Plus Query 332025 AAACGACGAGTTAATGCACTATCTTTCTCGATATTTTTACGATATTCATCATATGTTGTT 332084 |||||||| |||||| |||||| ||||| || |||||||||| | |||||| Sbjct 6170 AAACGACGCTCGAATGCAGGATCTTTTTCGAT---TTCACGATATTCAGTAAGTGTTGTA 6226 Query 332085 GCACCAATTACACGAATCTCACCACGTGAAAGTGCTGGCTTAAGCATATTGCTCATGTCC 332144 || || || || | |||||||| | || || || |||| |||| ||| Sbjct 6227 GCGCCGATGCATCGCAGTTCACCACGAGCCAGCATAGGTTTCAGCAGATTGGCAGCATCC 6286 Query 332145 ATAGAACCATTACTTGCGGAACCAGCCCCAACCATAATATGAATTTCATCAATGAAAACA 332204 |||||||| | || | ||| || |||| | | | || ||||||||||| || | | Sbjct 6287 ATAGAACCCTCACCTTT---ACCGGCACCAAGAACAGTGTGGATTTCATCAATAAACAAA 6343 Query 332205 ATAGTA---TTTTCACGTTTCTTTAGTTCTTTTAGCAAATTGTCGATGCGTTCTTCAAAT 332261 || || | |||| || ||| | |||||| | | | | || |||||||||||| Sbjct 6344 ATGATACCTTCTTCAGATTCCTTAACTTCTTTCAAGACAGCCTTGAGACGTTCTTCAAAT 6403 Query 332262 TCACCACGATACTTAGTACCAGCAGTCAATGCACC 332296 |||||||||||||| | ||||||| | || || || Sbjct 6404 TCACCACGATACTTGGCACCAGCAATTAAGGCGCC 6438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113821908783560